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Job DescriptionP09158
Confidence94.09%DateThu Jan 5 11:02:05 GMT 2012
Rank371Aligned Residues126
% Identity18%Templatec2px2B_
PDB info PDB header:transferaseChain: B: PDB Molecule:genome polyprotein [contains: capsid protein c PDBTitle: crystal structure of the murray valley encephalitis virus2 ns5 2'-o methyltransferase domain in complex with sah3 (monoclinic form 1)
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7980.........90.........100.........110.........120.........130.........140.........150........
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Query Sequence  KHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISD
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Template Sequence  GKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGP. . . . . . GHEEPMLMQSYGWNIVTMKSGVDVFY. . KPSEISDTLLCD
Template Known Secondary structure  T
TTSTTSTT


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STTGGG
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   75....80.........90.........100........ .110.........120.........130.... .....140......
 
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Query Sequence  . . CTDPIGPGESLFTSAFYEGCKRCLNPG. GIFVAQNGVCFLQQEEAIDSHRKLSHYFS
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Template Sequence  IGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCPYM. . PKVIEKLESLQRRFG
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S
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   147..150.........160.........170.........180........ .190.........200...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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