Job Description P09158 Confidence 91.59% Date Thu Jan 5 11:02:05 GMT 2012 Rank 427 Aligned Residues 112 % Identity 12% Template c2ldxA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:apo-lactate dehydrogenase; PDBTitle: characterization of the antigenic sites on the refined 3-2 angstroms resolution structure of mouse testicular lactate3 dehydrogenase c4 Resolution 2.96 Å

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		75	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		H	G	H	A	K	H	V	L	I	I	G	G	G	.	.	D	G	A	M	L	R	E	V	T	R	H	K	N	V	E	S	I	T	M	V	E	I	D	A	G	V	V	S	F	C	R	Q	Y	L	P	N	H	N	A	G	S	Y	D	D	P	R	F	K	L	V	I	D	D	G	V	N	F	V	N	Q	T	S	Q	T	F
Query Conservation															.	.
Alig confidence															.	.																																			.	.																						.	.	.	.	.
Template Conservation																																																			.	.																						.	.	.	.	.
Template Sequence		K	L	S	R	C	K	I	T	V	V	G	V	G	D	V	G	M	A	C	A	I	S	I	L	L	K	G	L	A	D	E	L	A	L	V	D	A	D	T	D	K	L	R	G	E	A	L	D	L	.	.	Q	H	G	S	L	F	L	S	T	P	K	I	V	F	G	K	D	Y	N	V	S	.	.	.	.	.	A	N	S
Template Known Secondary structure														S												T	T	T	S		S							S													.	.			T	T	T	T		S								S	S	G	G	G	G	.	.	.	.	.	T	T
Template Predicted Secondary structure																																																			.	.																						.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.						.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.										.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.
Query Sequence		D	V	I	I	S	D	C	T	D	P	I	G	P	G	E	S	L	F	T	.	.	.	.	.	.	.	.	.	S	A	F	Y	E	G	C	K	R	C	L	N	P	G	G	I	F	V	A	Q	N	G	V	C
Query Conservation																					.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.										.							.
Template Conservation																																							.							.
Template Sequence		K	L	V	I	I	T	A	G	A	R	M	V	S	G	Q	T	R	L	D	L	L	Q	R	N	V	A	I	M	K	A	I	V	P	G	V	I	Q	.	N	S	P	D	C	K	.	I	I	V	V	T	N	P
Template Known Secondary structure									S					T	T	T		S	S		T	T											T	T	T				.		S	T	T			.					S	S	S
Template Predicted Secondary structure																																							.							.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.		.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions