Job Description P09158 Confidence 98.32% Date Thu Jan 5 11:02:05 GMT 2012 Rank 254 Aligned Residues 145 % Identity 22% Template c2frxD_ PDB info PDB header:transferase Chain: D: PDB Molecule:hypothetical protein yebu; PDBTitle: crystal structure of yebu, a m5c rna methyltransferase from e.coli Resolution 2.90 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																	.																									.
Query SS confidence																	.																									.
Query Sequence		H	E	M	M	T	H	V	P	L	L	A	H	G	H	A	.	K	H	V	L	I	I	G	G	G	D	G	A	M	L	R	E	V	T	R	H	K	N	V	E	.	S	I	T	M	V	E	I	D	A	G	V	V	S	F	C	R	Q	Y	L	P	N	H	N	A	G	S	Y	D	D	P	R	F	K	L	V	I	D	D	G
Query Conservation																	.																									.
Alig confidence																	.																									.																				.	.	.	.	.
Template Conservation																																																														.	.	.	.	.
Template Sequence		S	S	X	L	P	V	A	A	L	F	A	D	G	N	A	P	Q	R	V	X	D	V	A	A	A	P	G	S	K	T	T	Q	I	S	A	R	X	N	N	E	G	A	I	L	A	N	E	F	S	A	S	R	V	K	V	L	H	A	N	I	.	.	.	.	.	S	R	C	G	I	S	N	V	A	L	T	H	F	D	G
Template Known Secondary structure												T	T	T				S					S	S		T	T	S										T	T	T		S							S	S												.	.	.	.	.				T			S								S
Template Predicted Secondary structure																																																														.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.						.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.																		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																					.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	N	F	V	N	Q	T	S	Q	T	F	D	V	I	I	S	D	C	T	.	D	P	I	G	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	L	F	T	S	A	F	Y	E	G	C	K	R	C	L	N	P	G	G	I	F	V	A	Q	N	G	V	C	F	L	Q	Q	E	E	A	I
Query Conservation																					.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation																																																																									.	.
Template Sequence		R	V	F	G	A	A	V	P	E	X	F	D	A	I	L	L	D	A	P	C	S	G	E	G	V	V	R	K	D	P	D	A	L	K	N	W	S	P	E	S	N	Q	E	I	A	A	T	Q	R	E	L	I	D	S	A	F	H	A	L	R	P	G	G	T	L	V	Y	S	T	C	T	.	.	L	N	Q	E	E	N	E
Template Known Secondary structure		T	T					S	T	T														G	G	G	G	G	T		T	T	S	S	S	S																							T												S		.	.		S	S	T	T	T
Template Predicted Secondary structure																																																																									.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.			.	250	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	H	R	K	L	S	H	Y	F	S	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	C	L	W	L	K	E	T	Y	P	D
Template Known Secondary structure											S	T	T
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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