Return to main results Retrieve Phyre Job Id

Job DescriptionP09158
Confidence94.23%DateThu Jan 5 11:02:05 GMT 2012
Rank365Aligned Residues94
% Identity18%Templatec1l7eC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:nicotinamide nucleotide transhydrogenase, PDBTitle: crystal structure of r. rubrum transhydrogenase domain i2 with bound nadh
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   77..80....... ..90.........100.........110.........120.........130.........140.........150.....
Predicted Secondary structure 




.



























Query SS confidence 










.



































































Query Sequence  HAKHVLIIGGG. DGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI
Query Conservation   
  




 
. 
      
       
  



  

  
   
         
 

 
   

   
      

 
Alig confidence 










.













.



















..............


















Template Conservation      




 
 

   
      
 . 
   
              ..............        
       


Template Sequence  PPARVLVFGVGVAGLQAIATAKRLGA. VVMATDVRAATKEQVESLGG. . . . . . . . . . . . . . KFIKQAEAVLKELVKTDIA
Template Known Secondary structure 




STT
.
SSTTSTTTT
..............

TT
S
Template Predicted Secondary structure 








.






..............






Template SS confidence 















































































   971........980.........990...... ...1000.........1010...... ...1020.........1030.....
 
   156...160.........170.........180.........
Predicted Secondary structure 













Query SS confidence 

































Query Sequence  ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFV
Query Conservation 
 
          
 
 

       
 
 

 
Alig confidence 

















....











Template Conservation 
            

   .... 
  

 
  

Template Sequence  ITTALIPGKPAPVLITEE. . . . MVTKMKPGSVII
Template Known Secondary structure 



TTS




S
....TS
TT
Template Predicted Secondary structure 













....



Template SS confidence 

































   1062.......1070......... 1080.........1090.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions