Return to main results Retrieve Phyre Job Id

Job DescriptionP09158
Confidence92.74%DateThu Jan 5 11:02:05 GMT 2012
Rank397Aligned Residues113
% Identity13%Templatec1ez4B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:lactate dehydrogenase; PDBTitle: crystal structure of non-allosteric l-lactate dehydrogenase2 from lactobacillus pentosus at 2.3 angstrom resolution
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   74.....80....... ..90.........100.........110.........120.........130.........140.........150.
Predicted Secondary structure 







..

























Query SS confidence 













. .































































Query Sequence  AHGHAKHVLIIGGG. . DGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQT
Query Conservation      
  




 
.. 
      
       
  



  

  
   
         
 

 
   

   
      
Alig confidence 













..































...





















.....

Template Conservation   
    

 




 

   
  
       

 
 
         
 ...

                  

.....  
Template Sequence  SMPNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDAL. . . DLEDAQAFTAPKKIYSGEYSDC. . . . . KD
Template Known Secondary structure 
BTTB


ST

S
SS...GGGGGS




GGGG.....TT
Template Predicted Secondary structure 

















...








.....

Template SS confidence 















































































   16...20.........30.........40.........50.........60... ......70.........80..... ..
 
   152.......160........ .170.........180.. .......190.....
Predicted Secondary structure 









.....


...






Query SS confidence 
















. . . . .













. . .












Query Sequence  FDVIISDCTDPIGPGES. . . . . LFTSAFYEGCKRCL. . . NPGGIFVAQNGVC
Query Conservation 

 

 
          .....
 
 

       
... 
 

 
      
Alig confidence 
















.....













...




.






Template Conservation 





  
     
  
      
  
   
   
    
 
 .

  


Template Sequence  ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGI. FLVAANP
Template Known Secondary structure 
S






TT

TT

S.
SSS
Template Predicted Secondary structure 













.

Template SS confidence 



















































   8990.........100.........110.........120.........130.. .......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions