Job Description P76524 Confidence 100.00% Date Thu Jan 5 12:24:02 GMT 2012 Rank 1 Aligned Residues 351 % Identity 44% Template c3q6dA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:proline dipeptidase; PDBTitle: xaa-pro dipeptidase from bacillus anthracis. Resolution 1.97 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	L	L	A	S	L	R	D	W	L	K	A	Q	Q	L	D	A	V	L	L	S	S	R	Q	N	K	Q	P	H	L	G	I	S	T	G	S	G	Y	V	V	I	S	R	E	S	A	H	I	L	V	D	S	R	Y	Y	V	E	V	E	A	R	A	Q	G	Y	Q	L	H	L	L	D	A	T	N	T	L	T	T	I
Query Conservation
Alig confidence																																																																									.	.
Template Conservation																																																																									.	.
Template Sequence		M	E	K	I	E	R	L	R	S	A	F	D	E	A	G	I	D	G	I	L	L	T	N	E	H	S	R	R	Y	M	A	N	F	T	G	T	A	G	V	V	L	I	S	K	K	R	A	Q	F	I	T	D	F	R	Y	V	E	Q	A	S	K	Q	A	V	G	Y	E	I	V	Q	H	.	.	A	G	L	I	I	D	E
Template Known Secondary structure										T	T					T		S																		S	S	S							S	S								G	G	G								S	T	T	S						.	.	S	S
Template Predicted Secondary structure																																																																									.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		V	N	Q	I	I	A	D	E	Q	L	Q	T	L	G	F	E	G	Q	Q	V	S	W	.	.	E	T	A	H	R	W	Q	S	E	L	N	A	K	L	V	S	A	T	P	D	V	L	R	Q	I	K	T	P	E	E	V	E	K	I	R	L	A	C	G	I	A	D	R	G	A	E	H	I	R	R	F	I	Q	A	G	M
Query Conservation																								.	.
Alig confidence																								.	.
Template Conservation
Template Sequence		V	A	K	Q	V	K	E	L	G	I	Q	K	L	G	F	E	Q	D	T	L	T	Y	S	S	Y	S	A	H	K	E	A	I	D	A	E	F	I	P	T	S	G	L	V	E	K	L	R	L	I	K	T	D	S	E	I	K	I	L	K	E	A	A	Q	I	A	D	A	A	F	E	H	I	L	S	F	I	R	P	G	V
Template Known Secondary structure										T		S						T	T	T	S														S							S							T	S																								T	T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	R	E	I	A	A	E	L	E	W	F	M	R	Q	Q	G	A	E	K	A	S	F	D	T	I	V	A	S	G	W	R	G	A	L	P	H	G	K	A	S	D	K	I	V	A	A	G	E	F	V	T	L	D	F	G	A	L	Y	Q	G	Y	C	S	D	M	T	R	T	L	L	V	N	G	E	G	V	S	A	E
Query Conservation
Alig confidence																																																																											.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.
Template Sequence		S	E	I	E	V	S	N	E	L	E	F	F	M	R	K	Q	G	A	T	S	S	S	F	D	I	I	V	A	S	G	L	R	S	A	L	P	H	G	V	A	S	E	K	V	I	E	T	G	D	F	V	T	L	D	F	G	A	Y	Y	K	G	Y	C	S	D	I	T	R	T	I	A	V	G	.	.	.	.	.	E	P
Template Known Secondary structure		B															T	T		S			S	S							G	G	G	G	G		T	T		B			S		B			T	T												T	T											S	S	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.						.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	L	L	F	N	V	Y	Q	I	V	L	Q	A	Q	L	A	A	I	S	A	I	R	P	G	V	R	C	Q	Q	V	D	D	A	A	R	R	V	I	T	E	A	G	Y	G	D	Y	F	G	H	N	T	G	H	A	I	G	I	E	V	H	E	D	P	R	F	S	P	R	D	T	T	T	L	Q	P	G	M	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	D	K	L	K	E	I	Y	N	I	V	L	E	A	Q	L	R	G	V	N	G	I	K	A	G	L	T	G	R	E	A	D	A	L	T	R	D	Y	I	T	E	K	G	Y	G	E	Y	F	G	H	S	T	G	H	G	I	G	L	E	I	H	E	A	P	G	L	A	F	R	S	D	T	V	L	E	P	G	M	A	V
Template Known Secondary structure																									T	T		B															T	T		G	G	G			S		S					S	S	S	S	S						S	T	T				B			T	T
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	E	P	G	I	Y	L	P	G	Q	G	G	V	R	I	E	D	V	V	L	V	T	P	Q	G	A	E	V	L	Y	A	M	P	K	T	V	L	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	E	P	G	I	Y	I	P	G	I	G	G	V	R	I	E	D	D	I	I	V	T	S	E	G	N	E	V	I	T	K	S	P	K	E	L	I	I	L
Template Known Secondary structure										T	T	T						B							S	S	S							S			S			B
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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