Job Description P76524 Confidence 100.00% Date Thu Jan 5 12:24:02 GMT 2012 Rank 11 Aligned Residues 345 % Identity 24% Template c3l24A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:xaa-pro dipeptidase; PDBTitle: crystal structure of the nerve agent degrading2 organophosphate anhydrolase/prolidase in complex with3 inhibitors Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.																			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Query Sequence		T	L	L	A	S	L	R	D	W	L	K	A	Q	Q	L	D	A	V	L	L	S	S	R	Q	N	K	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	H	L	G	I	S	T	G	S	G	Y	V	V	I	S	R	E	S	A	H	.	.	I	L	V	D	S	R	Y	Y	V	E	V	E	A
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation
Template Sequence		T	L	Q	K	R	T	R	E	I	I	E	R	E	N	L	D	G	V	V	F	H	S	G	Q	A	K	R	Q	F	L	D	D	M	Y	Y	P	F	K	V	N	P	Q	F	K	A	W	L	P	V	I	D	N	P	H	C	W	I	V	A	N	G	T	D	K	P	K	L	I	F	Y	R	P	V	D	F	W	H	K	V	P
Template Known Secondary structure														T	T		S											B		T	T	S	S		B											T	T	S	S			S		S	S							S	S	S												S	S	S
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	Q	G	Y	Q	L	H	L	L	D	A	T	N	T	L	T	T	I	V	N	Q	I	I	A	D	E	Q	L	Q	T	L	G	F	E	G	Q	Q	V	S	W	E	T	A	H	R	W	Q	S	E	L	N	A	K	L	V	S	A	T	P	D	V	L	R	Q	I	K	T	P	E	E	V	E	K	I	R	L	A	C	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	P	N	E	Y	W	A	D	Y	F	D	I	E	L	L	V	K	P	D	Q	V	E	K	L	L	P	Y	D	K	A	R	F	A	Y	I	G	E	Y	L	E	V	A	Q	A	L	G	F	E	L	M	N	P	E	P	V	M	N	F	Y	H	Y	H	R	A	Y	K	T	Q	Y	E	L	A	C	M	R	E	A	N	K
Template Known Secondary structure						S	G	G	G	G	G	S						S	S	G	G	G		G	G	G	S		S			T	T					S	S									T				B	S													T	S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		I	A	D	R	G	A	E	H	I	R	R	F	I	Q	A	G	M	S	E	R	E	I	A	A	E	L	E	W	F	M	R	Q	Q	G	A	E	K	A	S	F	D	T	I	V	A	S	G	W	R	G	A	L	P	H	G	K	A	S	D	K	I	V	.	A	A	G	E	F	V	T	L	D	F	G	A	L	Y	Q	G	Y
Query Conservation																																																																.
Alig confidence																																						.																										.
Template Conservation																																						.
Template Sequence		I	A	V	Q	G	H	K	A	A	R	D	A	F	F	Q	G	K	S	E	F	E	I	Q	Q	A	Y	L	L	A	T	Q	H	S	E	N	D	.	N	P	Y	G	N	I	V	A	L	N	E	N	C	A	I	L	H	Y	T	H	F	D	R	V	A	P	A	T	H	R	S	F	L	I	D	A	G	A	N	F	N	G	Y
Template Known Secondary structure																T	T															T			G	G	G	.	S	S	S							G	G	G	G	G		T	T						S	S			S	S													T	T
Template Predicted Secondary structure																																						.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280																			.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	S	D	M	T	R	T	L	L	V	N	G	E	G	V	S	A	E	S	H	L	L	F	N	V	Y	Q	I	V	L	Q	A	Q	L	A	A	I	S	A	I	R	P	G	V	R	C	Q	Q	V	D	D	A	A	R	R	V	I	T	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.
Template Sequence		A	A	D	I	T	R	T	Y	D	F	T	.	.	.	.	.	.	G	E	G	E	F	A	E	L	V	A	T	M	K	Q	H	Q	I	A	L	M	N	Q	L	A	P	G	K	L	Y	G	E	L	H	L	D	C	H	Q	R	V	A	Q	T	L	S	D	F	N	I	V	D	L	S	A	D	E	I	V	A	K	G	I	T
Template Known Secondary structure											S	S	.	.	.	.	.	.	S		S																		T	T			T	T		B																			T	T	S	B	S	S								T	T		G
Template Predicted Secondary structure													.	.	.	.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.							.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.																										.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure																				.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	Y	F	G	H	N	T	G	H	A	I	G	I	E	V	H	E	.	D	P	R	F	S	P	R	D	T	T	T	L	Q	P	G	M	L	L	T	V	E	P	G	I	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	Q	G	G	V	R	I	E	D
Query Conservation																				.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	T	F	F	P	H	G	L	G	H	H	I	G	L	Q	V	H	D	V	G	G	F	M	A	L	R	C	T	R	K	I	E	A	N	Q	V	F	T	I	E	P	G	L	Y	F	I	D	S	L	L	G	D	L	A	A	T	D	N	N	Q	H	I	N	W	D	K	V	A	E	L	K	P	F	G	G	I	R	I	E	D
Template Known Secondary structure		G	G	T			S		S			B		S	S	S	S	S					T	T				T	T		B			T	T																					T	S	G	G	G	G	G	B									G	G	G						B
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	L	V	T	P	Q	G	A	E	V	L	Y	A	M	P	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	I	V	H	E	D	S	L	E	N	M	T	R	E	L	R
Template Known Secondary structure							S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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