Job Description P76524 Confidence 100.00% Date Thu Jan 5 12:24:02 GMT 2012 Rank 10 Aligned Residues 345 % Identity 25% Template c3ig4E_ PDB info PDB header:hydrolase Chain: E: PDB Molecule:xaa-pro aminopeptidase; PDBTitle: structure of a putative aminopeptidase p from bacillus anthracis Resolution 2.89 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.																.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Query Sequence		L	L	A	S	L	R	D	W	L	K	A	Q	Q	L	D	A	V	L	L	S	S	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	Q	P	H	L	G	I	S	T	G	S	G	Y	V	V	I	S	R	E	S	.	.	.	.	A	H	I	L	V	D	S	R	Y	Y	V	E	V	E	A	R	A
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Alig confidence																.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Conservation																.
Template Sequence		N	R	E	R	L	V	N	T	L	P	D	E	S	I	.	T	I	L	F	A	G	Q	A	P	H	X	S	A	D	A	H	Y	K	F	V	P	N	R	N	F	Y	Y	V	T	G	I	D	E	P	N	V	I	F	X	L	K	K	F	G	N	S	V	E	E	T	L	F	I	E	K	S	D	P	V	X	E	K	W	V	G
Template Known Secondary structure								T	T	S		S	S			.													T	T																				T	T									T	T													T	T	G	G	G	T	T
Template Predicted Secondary structure																.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		64	.	.										.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.												.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	G	Y	.	.	.	.	.	.	.	.	.	Q	L	H	L	L	D	A	T	N	T	L	T	T	I	V	N	Q	I	I	A	D	E	Q	L	Q	T	L	G	F	E	G	Q	Q	V	S	W	.	.	.	.	.	.	.	.	.	.	.	E	T	A	H	R	W	Q	S	E	L	N	A	K	L	V	S	A	T	P	D	V
Query Conservation					.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	T	V	S	N	E	E	A	E	K	I	S	G	I	K	K	V	I	Y	L	D	S	F	E	K	T	X	S	N	I	F	F	T	E	N	V	K	H	L	Y	L	D	L	E	C	R	E	W	K	G	T	E	T	K	T	L	A	F	A	K	H	V	R	E	Q	Y	P	H	V	T	I	G	N	V	Y	P	N	I	C	E
Template Known Secondary structure																S					G	G	G										T	T	T														T	T																		T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	Q	I	K	T	P	E	E	V	E	K	I	R	L	A	C	G	I	A	D	R	G	A	E	H	I	R	R	F	I	Q	A	G	M	S	E	R	E	I	A	A	E	L	E	W	F	M	R	Q	Q	G	A	E	K	A	S	F	D	T	I	V	A	S	G	W	R	G	A	L	P	H	G	K	A	S	D	K	I	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	V	F	K	T	D	E	E	I	E	I	I	K	E	A	I	A	V	T	K	D	G	I	Y	N	V	L	K	H	A	K	A	D	X	X	E	Y	E	L	E	A	Q	F	D	F	T	L	K	S	S	G	I	K	H	H	A	F	N	T	I	L	A	S	G	K	N	A	T	V	L	H	Y	E	D	N	D	A	Q	I
Template Known Secondary structure				T	S																													S	S																	T	T					S	S							G	G	G	G	G	S	T	T						S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	G	E	F	V	T	L	D	F	G	A	L	Y	Q	G	Y	C	S	D	M	T	R	T	L	L	V	N	G	E	G	V	S	A	E	S	H	L	L	F	N	V	Y	Q	I	V	L	Q	A	Q	L	A	A	I	S	A	I	R	P	G	V	R	C	Q	Q	V	D	D	A	A	R	R	V	I	T	E	A	G	Y	G
Query Conservation
Alig confidence																															.	.	.	.
Template Conservation																															.	.	.	.
Template Sequence		Q	N	G	D	L	V	L	L	D	L	G	A	Q	K	D	Y	Y	N	A	D	I	S	Y	T	F	P	A	N	G	.	.	.	.	T	F	S	S	R	Q	K	Q	I	Y	N	I	V	L	N	A	L	K	E	T	T	E	I	I	K	P	G	L	K	F	A	A	L	N	E	H	A	K	K	V	L	A	E	G	C	K	A
Template Known Secondary structure			T	T												T	T											T	T	S	.	.	.	.																							T			T	T		B	T
Template Predicted Secondary structure																															.	.	.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.					.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
													284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330		.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																																.																					.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																																																.																					.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	D	Y	F	G	H	N	T	G	H	A	I	G	I	E	V	H	E	D	P	R	F	S	P	R	D	T	T	T	L	Q	P	G	M	L	L	T	V	E	P	G	I	Y	L	P	G	Q	G	.	G	V	R	I	E	D	V	V	L	V	T	P	Q	G	A	E	V	L	Y	A	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																																																.																					.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																				.	.	.																										.																					.
Template Conservation																																.	.	.
Template Sequence		V	G	L	I	Q	E	D	E	E	L	S	K	Y	Y	Y	H	G	V	S	H	F	L	G	L	D	T	H	D	V	G	.	.	.	T	Y	K	D	R	V	L	E	E	G	X	V	I	T	I	E	P	G	L	Y	I	E	E	E	S	I	G	I	R	I	E	D	D	I	L	V	T	K	D	G	H	E	N	L	S	K	D
Template Known Secondary structure			T	S		S	S	G	G	G	G	G	G	T			S		S			B		S	S	S	S	S			S	.	.	.			T	T		B			T	T												G	G	G	T						B							S	S	S				T	T	T	T
Template Predicted Secondary structure																																.	.	.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.				.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		351	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	K	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	R	E	V
Template Known Secondary structure		S			S
Template Predicted Secondary structure
Template SS confidence
		401	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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