Job Description P76524 Confidence 100.00% Date Thu Jan 5 12:24:02 GMT 2012 Rank 33 Aligned Residues 235 % Identity 20% Template c3fm3B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:methionine aminopeptidase 2; PDBTitle: crystal structure of an encephalitozoon cuniculi methionine2 aminopeptidase type 2 Resolution 2.18 Å

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		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.					180	.
Predicted Secondary structure																																																																												.	.	.	.
Query SS confidence																																																																												.	.	.	.
Query Sequence		H	R	W	Q	S	E	L	N	A	K	L	V	S	A	T	P	D	V	L	R	Q	I	K	T	P	E	E	V	E	K	I	R	L	A	C	G	I	A	D	R	G	A	E	H	I	R	R	F	I	Q	A	G	M	S	E	R	E	I	A	A	E	L	E	W	F	M	R	Q	Q	G	A	E	K	A	.	.	.	.	S	F
Query Conservation																																																																												.	.	.	.
Alig confidence																	.	.																																																										.	.	.	.
Template Conservation																	.	.
Template Sequence		D	G	V	Y	G	K	G	K	L	F	D	S	R	N	M	.	.	E	I	E	N	F	T	E	S	D	I	L	Q	D	A	R	R	A	A	E	A	H	R	R	A	R	Y	R	V	Q	S	I	V	R	P	G	I	T	L	L	E	I	V	R	S	I	E	D	S	T	R	T	L	L	K	G	E	R	N	N	G	I	G	F
Template Known Secondary structure		T											T	T			.	.																														T	T			T	T		B																T	T	T	S	G	G	G	G
Template Predicted Secondary structure																	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.					.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		D	T	I	V	A	S	G	W	R	G	A	L	P	H	G	K	A	.	.	.	.	S	D	K	I	V	A	A	G	E	F	V	T	L	D	F	G	A	L	Y	Q	G	Y	C	S	D	M	T	R	T	L	L	V	N	G	E	G	V	S	A	E	S	H	L	L	F	N	V	Y	Q	I	V	L	Q	A	Q	L	A	A	I
Query Conservation																			.	.	.	.
Alig confidence													.	.					.	.	.	.																																		.	.	.	.	.	.	.	.
Template Conservation													.	.																																										.	.	.	.	.	.	.	.
Template Sequence		P	A	G	M	S	M	N	S	C	A	A	.	.	H	Y	T	V	N	P	G	E	Q	D	I	V	L	K	E	D	D	V	L	K	I	D	F	G	T	H	S	D	G	R	I	M	D	S	A	F	T	V	A	F	K	.	.	.	.	.	.	.	.	E	N	L	E	P	L	L	V	A	A	R	E	G	T	E	T	G	I
Template Known Secondary structure								T	T				.	.						T	T					B			T	T												T	T													.	.	.	.	.	.	.	.	G	G	G
Template Predicted Secondary structure													.	.																																										.	.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.									150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280										.	.	.	.	.	.	.	.	.	290	.	.	.	.	.		.	.	.	.	300	.				.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.																.							.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.																.							.	.	.
Query Sequence		S	A	I	R	P	G	V	R	C	Q	Q	V	D	D	A	A	R	R	V	I	T	E	A	.	.	.	.	.	.	.	.	.	G	Y	G	D	Y	F	G	H	N	T	G	H	A	I	G	.	I	E	V	H	E	D	.	.	.	P	R	F	S	P	R	D	T	T	T	L	Q	P	G	M	L	L	T	V	E	P	G	I
Query Conservation																									.	.	.	.	.	.	.	.	.																.							.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.					.											.							.	.	.
Template Conservation																																						.
Template Sequence		K	S	L	G	V	D	V	R	V	C	D	I	G	R	D	I	N	E	V	I	S	S	Y	E	V	E	I	G	G	R	M	W	P	I	R	P	.	I	S	D	L	H	G	H	S	I	S	Q	F	R	I	H	G	G	I	S	I	P	A	V	N	N	R	D	T	T	R	I	K	G	D	S	F	Y	A	V	E	T	F	A
Template Known Secondary structure						T	T		B													T	T						T	T								.		T	T							B	T	T	B	S			S					S	S							B			S	S
Template Predicted Secondary structure																																						.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		325
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	T	G	K	G	S	I	D	D	R	P	P	C	S	H	F	V	L	N	T	Y	K	S	R	K	L	F	N	K	D	L	I	K	V	Y	E	F	V	K	D	S	L	G	T	L	P	F	S	P	R	H	L	D	Y	Y	G	L	V	K	G	G	S	L	K	S	V	N	L	L	T	M	M	G	L	L	T	P	Y	P	P
Template Known Secondary structure			S	S		S						S									S	S																					T	T	T	S		B							T	T	T		S	T	T		S										T	T	S
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
					326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	L	P	G	Q	G	G	V	R	I	E	D	V	V	L	V	T	P	Q	G	A	E	V	L	Y	A	M	P	K
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		L	N	D	I	D	G	C	K	V	A	Q	F	E	H	T	V	Y	L	S	E	H	G	K	E	V	L	T	R	G	D	D
Template Known Secondary structure					S	T	T														T	T					S	S			S
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions