Job Description P76524 Confidence 100.00% Date Thu Jan 5 12:24:02 GMT 2012 Rank 4 Aligned Residues 343 % Identity 37% Template c2zsgB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:aminopeptidase p, putative; PDBTitle: crystal structure of x-pro aminopeptidase from thermotoga maritima2 msb8 Resolution 1.65 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.						.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		D	W	L	K	A	Q	Q	L	D	A	V	L	L	S	S	R	Q	N	K	Q	P	H	L	G	I	.	.	.	.	.	S	T	G	S	G	Y	V	V	I	S	R	E	S	A	H	I	L	V	D	S	R	Y	Y	V	E	V	E	A	R	A	Q	G	Y	Q	L	H	L	L	D	A	T	N	T	L	T	T	I	V	N	Q
Query Conservation																											.	.	.	.	.
Alig confidence																											.	.	.	.	.																																	.	.
Template Conservation																																																																.	.
Template Sequence		R	S	E	R	L	I	G	I	D	A	F	L	I	M	N	I	E	N	S	A	R	A	S	S	V	Y	F	S	G	F	T	G	S	F	S	I	I	L	I	S	E	N	T	R	L	L	I	T	D	S	R	Y	T	V	Q	A	K	Q	E	T	D	F	.	.	E	V	R	E	V	K	G	G	D	F	I	D	V	L	K	K
Template Known Secondary structure																	S	T	T	T	T												S	S								S	S								T	T	T										S	.	.							S	S
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.				.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		I	I	A	D	E	Q	L	Q	T	L	G	F	E	G	Q	Q	V	S	.	.	.	W	E	T	A	H	R	W	Q	S	E	L	N	A	K	L	V	S	A	T	P	D	V	L	R	Q	I	K	T	P	E	E	V	E	K	I	R	L	A	C	G	I	A	D	R	G	A	E	H	I	R	R	F	I	Q	A	G	M	S	E
Query Conservation																				.	.	.
Alig confidence																				.	.	.
Template Conservation
Template Sequence		T	V	N	D	L	K	I	K	T	I	A	L	E	E	E	R	V	S	L	S	L	F	R	R	I	S	S	A	F	G	D	R	K	F	I	G	I	D	D	E	V	K	Q	M	R	M	V	K	D	E	G	E	I	E	K	I	K	Q	A	I	E	I	S	E	R	A	F	L	E	T	V	Q	Q	I	R	A	G	M	T	E
Template Known Secondary structure						T	T								G	G	G	S													T	T																S																									T	T			T	T		B
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	I	A	A	E	L	E	W	F	M	R	Q	Q	G	A	E	K	A	S	F	D	T	I	V	A	S	G	W	R	G	A	L	P	H	G	K	A	S	D	K	I	V	A	A	G	E	F	V	T	L	D	F	G	A	L	Y	Q	G	Y	C	S	D	M	T	R	T	L	L	V	N	G	E	G	V	S	A	E	S	H
Query Conservation
Alig confidence																																																																									.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.
Template Sequence		K	E	I	A	A	L	L	E	Y	T	M	R	K	E	G	A	E	G	V	A	F	D	T	I	V	A	S	G	C	R	S	A	L	P	H	G	K	A	S	D	K	V	V	E	R	G	D	V	I	V	I	D	F	G	A	T	Y	E	N	Y	C	A	D	I	T	R	V	V	S	I	G	.	.	.	.	.	E	P	S	D
Template Known Secondary structure															T	T		S			S	S							G	G	G	G	G		T	T					S		B			T	T												T	T											S	S	.	.	.	.	.	S
Template Predicted Secondary structure																																																																									.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.						.	.	240	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	F	N	V	Y	Q	I	V	L	Q	A	Q	L	A	A	I	S	A	I	R	P	G	V	R	C	Q	Q	V	D	D	A	A	R	R	V	I	T	E	A	G	Y	G	D	Y	F	G	H	N	T	G	H	A	I	G	I	E	V	H	E	D	P	R	F	S	P	R	D	T	T	T	L	Q	P	G	M	L	L	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	K	E	V	H	S	I	V	L	E	A	Q	E	R	A	L	K	I	A	K	A	G	V	T	G	K	L	L	D	S	V	A	R	E	F	I	R	E	K	G	Y	G	E	F	F	G	H	S	L	G	H	G	I	G	L	E	V	H	E	G	P	A	I	S	F	R	N	D	S	P	L	P	E	N	V	V	F	T	V
Template Known Secondary structure																							T	T		B															T	T		G	G	G	B		S		S					S	S	S	S	S						S	T	T			S	B			T	T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	G	I	Y	L	P	G	Q	G	G	V	R	I	E	D	V	V	L	V	T	P	Q	G	A	E	V	L	Y	A	M	P	K	T	V	L	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	P	G	I	Y	L	E	G	K	F	G	I	R	I	E	E	D	V	V	L	K	E	Q	G	C	E	I	L	T	T	L	P	R	S	I	F	V	V
Template Known Secondary structure								T	T	T						B							S	S	S							S			S
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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