Job Description P76524 Confidence 100.00% Date Thu Jan 5 12:24:02 GMT 2012 Rank 8 Aligned Residues 349 % Identity 30% Template c2oknB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:xaa-pro dipeptidase; PDBTitle: crystal strcture of human prolidase Resolution 2.45 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.						.	.	20	.	.	.	.																	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Query SS confidence																	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Query Sequence		L	L	A	S	L	R	D	W	L	K	A	Q	Q	L	D	.	.	.	.	.	A	V	L	L	S	S	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	N	K	Q	P	H	L	G	I	S	T	G	S	G	Y	V	V	I	S	R	E	S	.	.	A	H	I	L	V	D	S	R	Y	Y	V	E	V
Query Conservation																	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Alig confidence																	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation
Template Sequence		N	R	Q	R	L	C	E	R	L	R	K	N	P	A	V	Q	A	G	S	I	V	V	L	Q	G	G	E	E	T	Q	R	Y	C	T	D	T	G	V	L	F	R	Q	E	S	F	F	H	W	A	F	G	V	T	E	P	G	C	Y	G	V	I	D	V	D	T	G	K	S	T	L	F	V	P	R	L	P	A	S	H	A
Template Known Secondary structure													S	T	T			T	T													S	T	T	S	S																			S	T	T							T	T	T												G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		60	.	.	.	.	.	.										.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.					.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.																																					.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.																																					.	.	.	.
Query Sequence		E	A	R	A	Q	G	Y	.	.	.	.	.	.	.	.	.	Q	L	H	L	L	D	A	T	N	T	L	T	T	I	V	N	Q	I	I	A	D	E	Q	L	Q	T	L	G	F	E	G	Q	Q	V	S	W	.	.	.	.	E	T	A	H	R	W	Q	S	E	L	N	A	K	L	V	S	A	T	P	D	V	L	R	Q
Query Conservation									.	.	.	.	.	.	.	.	.																																					.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template Conservation
Template Sequence		T	W	M	G	K	I	H	S	K	E	H	F	K	E	K	Y	A	V	D	D	V	Q	Y	V	D	E	I	A	S	V	L	T	S	Q	K	P	S	V	L	L	T	L	R	G	V	N	T	D	S	G	S	V	C	R	E	A	S	F	D	G	I	S	K	F	E	V	N	N	T	I	L	H	P	E	I	V	E	C	R	V
Template Known Secondary structure		G	T	S	S	S												T		S					G	G	G											S								B		T	T	T			B							T	T	G	G	G	S					S	S
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.					.	.	.	200	.
Predicted Secondary structure																																																			.																						.	.	.	.
Query SS confidence																																																			.																						.	.	.	.
Query Sequence		I	K	T	P	E	E	V	E	K	I	R	L	A	C	G	I	A	D	R	G	A	E	H	I	R	R	F	I	Q	A	G	M	S	E	R	E	I	A	A	E	L	E	W	F	M	R	Q	Q	G	.	A	E	K	A	S	F	D	T	I	V	A	S	G	W	R	G	A	L	P	H	G	.	.	.	.	K	A	S	D	K
Query Conservation																																																			.																						.	.	.	.
Alig confidence																																																			.																						.	.	.	.
Template Conservation
Template Sequence		F	K	T	D	M	E	L	E	V	L	R	Y	T	N	K	I	S	S	E	A	H	R	E	V	M	K	A	V	K	V	G	M	K	E	Y	E	L	E	S	L	F	E	H	Y	C	Y	S	R	G	G	M	R	H	S	S	Y	T	C	I	C	G	S	G	E	N	S	A	V	L	H	Y	G	H	A	G	A	P	N	D	R
Template Known Secondary structure		S																													T	T		B																						S	S							G	G	G	G	G	S	S	S		S	S	T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		I	V	A	A	G	E	F	V	T	L	D	F	G	A	L	Y	Q	G	Y	C	S	D	M	T	R	T	L	L	V	N	G	E	G	V	S	A	E	S	H	L	L	F	N	V	Y	Q	I	V	L	Q	A	Q	L	A	A	I	S	A	I	R	P	G	V	R	C	Q	Q	V	D	D	A	A	R	R	V	I	T	E	.	.
Query Conservation																																																																																.	.
Alig confidence																																	.	.	.	.																																												.	.
Template Conservation																																	.	.	.	.
Template Sequence		T	I	Q	N	G	D	M	C	L	F	D	M	G	G	E	Y	Y	C	F	A	S	D	I	T	C	S	F	P	A	N	G	.	.	.	.	K	F	T	A	D	Q	K	A	V	Y	E	A	V	L	R	S	S	R	A	V	M	G	A	M	K	P	G	V	W	W	P	D	M	H	R	L	A	D	R	I	H	L	E	E	L
Template Known Secondary structure		B			T	T											B	T	T	B										T	T	S	.	.	.	.																										T	T		B
Template Predicted Secondary structure																																	.	.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.					.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
																		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.														300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	Y	G	D	Y	F	G	H	N	T	G	H	A	I	G	I	E	V	H	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	P	R	F	S	P	R	D	T	T	T	L	Q	P	G	M	L	L	T	V	E	P	G	I	Y	L	P	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Template Conservation
Template Sequence		A	H	M	G	I	L	S	G	S	V	D	A	M	V	Q	A	H	L	G	A	V	F	M	P	H	G	L	G	H	F	L	G	I	D	V	H	D	V	G	G	Y	P	E	G	V	E	R	I	D	E	P	G	L	R	S	L	R	T	A	R	H	L	Q	P	G	M	V	L	T	V	E	P	G	I	Y	F	I	D	H	L
Template Known Secondary structure				T	T	S	B		S								T	T	T							S		S			B		S	S	S	S	S		S		S	S		T	T						S	T	T	G	G	G		S				B			T	T
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
																									328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	G	G	V	R	I	E	D	V	V	L	V	T	P	Q	G	A	E	V	L	Y	A	M	P	K	T	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	E	A	L	A	D	P	A	R	A	S	F	F	N	R	E	V	L	Q	R	F	R	G	F	G	G	V	R	I	E	E	D	V	V	V	T	D	S	G	I	E	L	L	T	C	V	P	R	T	V
Template Known Secondary structure													T	T	B									T	T							B							S	S	S										S
Template Predicted Secondary structure
Template SS confidence
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.