Job Description P76524 Confidence 100.00% Date Thu Jan 5 12:24:02 GMT 2012 Rank 3 Aligned Residues 347 % Identity 32% Template c2howB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:356aa long hypothetical dipeptidase; PDBTitle: dipeptidase (ph0974) from pyrococcus horikoshii ot3 Resolution 2.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.						.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.
Query SS confidence																																					.	.	.	.	.
Query Sequence		L	L	A	S	L	R	D	W	L	K	A	Q	Q	L	D	A	V	L	L	S	S	R	Q	N	K	Q	P	H	L	G	I	S	T	G	S	.	.	.	.	.	G	Y	V	V	I	S	R	E	S	A	H	I	L	V	D	S	R	Y	Y	V	E	V	E	A	R	A	Q	G	Y	Q	L	H	L	L	D	A	T	N	T	L
Query Conservation																																					.	.	.	.	.
Alig confidence																																					.	.	.	.	.																												.	.	.
Template Conservation																																																																					.	.	.
Template Sequence		R	L	E	K	F	I	H	L	L	G	E	R	G	F	D	G	A	L	I	S	P	G	T	N	L	Y	Y	L	T	G	L	R	L	H	E	V	G	E	R	L	A	I	L	A	V	S	A	E	G	D	Y	R	F	L	A	P	S	L	Y	E	N	V	V	N	N	F	P	.	.	.	A	T	F	W	H	D	G	E	N	P
Template Known Secondary structure													T	T								S	S												S			T	T	S								T	T	S								G	G	G	T	T	T	T	T	T		S	.	.	.						T	T	S
Template Predicted Secondary structure																																																																					.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure															.	.													.
Query SS confidence															.	.													.
Query Sequence		T	T	I	V	N	Q	I	I	A	D	E	Q	L	.	.	Q	T	L	G	F	E	G	Q	Q	V	S	W	.	E	T	A	H	R	W	Q	S	E	L	N	A	K	L	V	S	A	T	P	D	V	L	R	Q	I	K	T	P	E	E	V	E	K	I	R	L	A	C	G	I	A	D	R	G	A	E	H	I	R	R	F	I
Query Conservation															.	.													.
Alig confidence															.	.													.
Template Conservation
Template Sequence		Y	A	K	L	R	E	I	L	E	E	L	G	I	S	K	G	R	I	L	I	E	D	T	M	R	A	D	W	L	I	G	I	M	K	L	G	K	F	T	F	Q	P	L	S	S	L	I	K	E	L	R	M	I	K	D	K	E	E	V	K	M	M	E	H	A	S	R	I	A	D	K	V	F	E	E	I	L	T	W	D
Template Known Secondary structure												T	T		S								T	T	S									T	T	S	S							T									T	S																								T	T	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	G	M	S	E	R	E	I	A	A	E	L	E	W	F	M	R	Q	Q	G	A	E	K	A	S	F	D	T	I	V	A	S	G	W	R	G	A	L	P	H	G	K	A	S	D	K	I	V	A	A	G	E	F	V	T	L	D	F	G	A	L	Y	Q	G	Y	C	S	D	M	T	R	T	L	L	V	N	G	E	G
Query Conservation
Alig confidence																									.																																																						.	.	.
Template Conservation																									.																																																						.	.	.
Template Sequence		L	I	G	M	K	E	R	E	L	A	L	K	I	E	L	L	I	R	E	L	S	D	G	.	I	A	F	E	P	I	V	A	S	G	E	N	A	A	N	P	H	H	E	P	G	E	R	K	I	R	K	G	D	I	I	I	L	D	Y	G	A	R	W	K	G	Y	C	S	D	I	T	R	T	I	G	L	G	.	.	.
Template Known Secondary structure			T	T		B																S	S		.		S	S							G	G	G	G	G		T	T					S		B			T	T												T	T											S	S	.	.	.
Template Predicted Secondary structure																									.																																																						.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	A	E	S	H	L	L	F	N	V	Y	Q	I	V	L	Q	A	Q	L	A	A	I	S	A	I	R	P	G	V	R	C	Q	Q	V	D	D	A	A	R	R	V	I	T	E	A	G	Y	G	D	Y	F	G	H	N	T	G	H	A	I	G	I	E	V	H	E	D	P	R	F	S	P	R	D	T	T	T	L	Q	P
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	E	L	D	E	R	L	V	K	I	Y	E	V	V	K	D	A	Q	E	S	A	F	K	A	V	R	E	G	I	K	A	K	D	V	D	S	R	A	R	E	V	I	S	K	A	G	Y	G	E	Y	F	I	H	R	T	G	H	G	L	G	L	D	V	H	E	E	P	Y	I	G	P	D	G	E	V	I	L	K	N
Template Known Secondary structure		.	.	S																								B	T	T	S	B															T	T		G	G	G			S		S					S	S	S	S	S						S	T	T				B			T
Template Predicted Secondary structure		.	.
Template SS confidence
				235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	L	L	T	V	E	P	G	I	Y	L	P	G	Q	G	G	V	R	I	E	D	V	V	L	V	T	P	Q	G	A	E	V	L	Y	A	M	P	K	T	V	L	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	M	T	F	T	I	E	P	G	I	Y	V	P	G	L	G	G	V	R	I	E	D	D	I	V	V	D	E	G	K	G	R	R	L	T	K	A	E	R	E	L	I	I	L
Template Known Secondary structure		T												T	T	T						B							T	T					S						S
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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