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Job DescriptionP76524
Confidence100.00%DateThu Jan 5 12:24:02 GMT 2012
Rank20Aligned Residues232
% Identity25%Templatec1yj3A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:methionine aminopeptidase; PDBTitle: crystal structure analysis of product bound methionine2 aminopeptidase type 1c from mycobacterium tuberculosis
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   114.....120.........130.........140.........150.........160.........170...... ...180........
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Query Sequence  AKLVSATPDVLRQIKTPEEVEKIRLACGIADRGAEHIRRFIQAGMSEREIAAELEWFMRQQGA. . . . . EKASFDTIVASG
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Template Sequence  VGKPAAQEGSEPWVQTPEVIEKMRVAGRIAAGALAEAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTS
Template Known Secondary structure  TTSSS
S
S
S
SB

T
STT
BTT
TTTTSTT

SS
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   28.30.........40.........50.........60.........70.........80.........90.........100.......
 
   189190.........200.........210.........220.........230.........240.........250.........260........
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Query Sequence  WRGALPHGKASDKIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESHLLFNVYQIVLQAQLAAISAIRPGVRCQQ
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Template Sequence  LNEVICHGIPDSTVITDGDIVNIDVTAYIGGVHGDTNATFPAG. . . . . DVADEHRLLVDRTREATMRAINTVKPGRALSV
Template Known Secondary structure  TT




S
B

TT
TT
S.....S

TT

TTSBT
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   108.110.........120.........130.........140.........150 .........160.........170.........180..
 
   269270.........280.........290.........300.... .....310.........320.......
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Query Sequence  VDDAARRVITEAGYGDYFGHNTGHAIGIEVHEDPRF. . . . SPRDTTTLQPGMLLTVEPGIYLP. . . . . . . . . . . . . . . . .
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Template Sequence  IGRVIESYANRFGYNV. VRDFTGHGIGTTFHNGLVVLHYDQPAVETIMQPGMTFTIEPMINLGALDYEIWDDGWTVVTKD
Template Known Secondary structure  TT
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SSS
B
SSSSS
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SS

TT


B

TTB

SS
S

TTS

TT
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   183......190........ .200.........210.........220.........230.........240.........250.........260.
 
   328.330.........340.........350.
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Query Sequence  GQGGVRIEDVVLVTPQGAEVLYAM
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Template Sequence  RKWTAQFEHTLLVTDTGVEILTCL
Template Known Secondary structure 



B
SSS
S

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   262.......270.........280.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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