Job Description P76524 Confidence 100.00% Date Thu Jan 5 12:24:02 GMT 2012 Rank 2 Aligned Residues 342 % Identity 39% Template c1wy2B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:xaa-pro dipeptidase; PDBTitle: crystal structure of the prolidase from pyrococcus horikoshii ot3 Resolution 1.70 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		L	L	A	S	L	R	D	W	L	K	A	Q	Q	L	D	A	V	L	L	S	S	R	Q	N	K	Q	P	H	L	G	I	S	T	.	G	S	G	Y	V	V	I	S	R	E	S	A	H	I	L	V	D	S	R	Y	Y	V	E	V	E	A	R	A	Q	G	Y	Q	L	H	L	L	D	A	T	N	T	L	T	T	I	V
Query Conservation																																			.
Alig confidence																																			.																															.
Template Conservation																																																																		.
Template Sequence		K	V	K	K	I	I	E	F	M	D	K	N	S	I	D	A	V	L	I	A	K	N	P	N	V	Y	Y	I	S	G	A	S	P	L	A	G	G	Y	I	L	I	T	G	E	S	A	T	L	Y	V	P	E	L	E	Y	E	M	A	K	E	E	S	N	I	.	P	V	E	K	F	K	K	M	D	E	F	Y	K	A	L
Template Known Secondary structure													T	T		S						S									S				S	S								S	S								G	G	G									S	S	.						S	S
Template Predicted Secondary structure																																																																		.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		N	Q	I	I	A	D	E	Q	L	Q	T	L	G	F	E	G	Q	Q	V	.	.	S	W	E	T	A	H	R	W	Q	S	E	L	N	A	K	L	V	S	A	T	P	D	V	L	R	Q	I	K	T	P	E	E	V	E	K	I	R	L	A	C	G	I	A	D	R	G	A	E	H	I	R	R	F	I	Q	A	G	M	S
Query Conservation																					.	.
Alig confidence			.	.	.	.	.	.													.	.
Template Conservation			.	.	.	.	.	.
Template Sequence		E	.	.	.	.	.	.	G	I	K	S	L	G	I	E	S	S	L	P	Y	G	F	I	E	E	L	K	K	K	A	N	I	K	E	F	K	K	V	D	D	V	I	R	D	M	R	I	I	K	S	E	K	E	I	K	I	I	E	K	A	C	E	I	A	D	K	A	V	M	A	A	I	E	E	I	T	E	G	K	K
Template Known Secondary structure		T	.	.	.	.	.	.	T		S						T	T																														T	S																													T	T		B
Template Predicted Secondary structure			.	.	.	.	.	.
Template SS confidence
		86							.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	E	I	A	A	E	L	E	W	F	M	R	Q	Q	G	A	E	K	A	S	F	D	T	I	V	A	S	G	W	R	G	A	L	P	H	G	K	A	S	D	K	I	V	A	A	G	E	F	V	T	L	D	F	G	A	L	Y	Q	G	Y	C	S	D	M	T	R	T	L	L	V	N	G	E	G	V	S	A	E	S
Query Conservation
Alig confidence																																																																										.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.
Template Sequence		E	R	E	V	A	A	K	V	E	Y	L	M	K	M	N	G	A	E	K	P	A	F	D	T	I	I	A	S	G	Y	R	S	A	L	P	H	G	V	A	S	D	K	R	I	E	R	G	D	L	V	V	I	D	L	G	A	L	Y	Q	H	Y	N	S	D	I	T	R	T	I	V	V	G	.	.	.	.	.	S	P	N
Template Known Secondary structure																T	T		S			S	S							G	G	G	G	G	S	T	T		B			S		B			T	T												T	T											S	S	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.						.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	L	F	N	V	Y	Q	I	V	L	Q	A	Q	L	A	A	I	S	A	I	R	P	G	V	R	C	Q	Q	V	D	D	A	A	R	R	V	I	T	E	A	G	Y	G	D	Y	F	G	H	N	T	G	H	A	I	G	I	E	V	H	E	D	P	R	F	S	P	R	D	T	T	T	L	Q	P	G	M	L	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	Q	K	E	I	Y	E	I	V	L	E	A	Q	K	K	A	V	E	S	A	K	P	G	I	T	A	K	E	L	D	S	I	A	R	N	I	I	A	E	Y	G	Y	G	E	Y	F	N	H	S	L	G	H	G	V	G	L	E	V	H	E	W	P	R	V	S	Q	Y	D	E	T	V	L	R	E	G	M	V	I	T
Template Known Secondary structure																								T	T	S	B															T	T		G	G	G			S		S					S	S	S	S	S						S	T	T				B			T	T
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	P	G	I	Y	L	P	G	Q	G	G	V	R	I	E	D	V	V	L	V	T	P	Q	G	A	E	V	L	Y	A	M	P	K	T	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	P	G	I	Y	I	P	K	I	G	G	V	R	I	E	D	T	I	L	I	T	K	N	G	S	K	R	L	T	K	T	E	R	E	L	I
Template Known Secondary structure									T	T	T						B							S	S	S				S	S				S
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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