Job Description P76524 Confidence 100.00% Date Thu Jan 5 12:24:02 GMT 2012 Rank 7 Aligned Residues 348 % Identity 24% Template c1w7vD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:xaa-pro aminopeptidase; PDBTitle: znmg substituted aminopeptidase p from e. coli Resolution 2.0 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.															.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.						.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Query Sequence		L	L	A	S	L	R	D	W	L	K	A	Q	Q	L	D	A	V	L	L	S	S	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	N	K	Q	P	H	L	G	I	S	T	G	S	G	Y	V	V	I	S	R	E	S	.	.	.	.	.	A	H	I	L	V	D	S	R	Y	Y	V	E	V	E	A	R	A
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Template Conservation
Template Sequence		R	R	Q	A	L	V	E	Q	M	Q	P	G	S	A	A	L	I	F	A	A	P	E	V	T	R	S	A	D	S	E	Y	P	Y	R	Q	N	S	D	F	W	Y	F	T	G	F	N	E	P	E	A	V	L	V	L	I	K	S	D	D	T	H	N	H	S	V	L	F	N	R	V	R	D	L	T	A	E	I	W	F	G
Template Known Secondary structure										S		S	S															T	T																				S	S									S	S	S
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		64	.	.										.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.													.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	G	Y	.	.	.	.	.	.	.	.	.	Q	L	H	L	L	D	A	T	N	T	L	T	T	I	V	N	Q	I	I	A	D	E	Q	L	Q	T	L	G	F	E	G	Q	Q	V	S	.	.	.	.	.	.	.	.	.	.	.	.	W	E	T	A	H	R	W	Q	S	E	L	N	A	K	L	V	S	A	T	P	D
Query Conservation					.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	R	L	G	Q	D	A	A	P	E	K	L	G	V	D	R	A	L	A	F	S	E	I	N	Q	Q	L	Y	Q	L	L	N	G	L	D	V	V	Y	H	A	Q	G	E	Y	A	Y	A	D	V	I	V	N	S	A	L	E	K	L	R	K	G	S	R	Q	N	L	T	A	P	A	T	M	I	D	W	R	P	V	V	H
Template Known Secondary structure														T		S					G	G	G										T	T		S						T	T	S																	T		G	G	G	T					S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	R	Q	I	K	T	P	E	E	V	E	K	I	R	L	A	C	G	I	A	D	R	G	A	E	H	I	R	R	F	I	Q	A	G	M	S	E	R	E	I	A	A	E	L	E	W	F	M	R	Q	Q	G	A	E	K	A	S	F	D	T	I	V	A	S	G	W	R	G	A	L	P	H	G	K	A	S	D	K	I
Query Conservation
Alig confidence																																																																												.
Template Conservation																																																																												.
Template Sequence		E	M	R	L	F	K	S	P	E	E	I	A	V	L	R	R	A	G	E	I	T	A	M	A	H	T	R	A	M	E	K	C	R	P	G	M	F	E	Y	H	L	E	G	E	I	H	H	E	F	N	R	H	G	A	R	Y	P	S	Y	N	T	I	V	G	S	G	E	N	G	C	I	L	H	Y	.	T	E	N	E	E
Template Known Secondary structure						S																													T	T	S																T	T					S	S							G	G	G	G	G	S	T	T		.
Template Predicted Secondary structure																																																																												.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		V	A	A	G	E	F	V	T	L	D	F	G	A	L	Y	Q	G	Y	C	S	D	M	T	R	T	L	L	V	N	G	E	G	V	S	A	E	S	H	L	L	F	N	V	Y	Q	I	V	L	Q	A	Q	L	A	A	I	S	A	I	R	P	G	V	R	C	Q	Q	V	D	D	A	A	R	R	V	I	T	E	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																																.	.	.	.																																												.	.	.
Template Conservation																																.	.	.	.
Template Sequence		M	R	D	G	D	L	V	L	I	D	A	G	C	E	Y	K	G	Y	A	G	D	I	T	R	T	F	P	V	N	G	.	.	.	.	K	F	T	Q	A	Q	R	E	I	Y	D	I	V	L	E	S	L	E	T	S	L	R	L	Y	R	P	G	T	S	I	L	E	V	T	G	E	V	V	R	I	M	V	S	G	L	V
Template Known Secondary structure				T	T												T	T											T	T	S	.	.	.	.																									S	T	T
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280					.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
																	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330										.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	Y	G	D	Y	F	G	H	N	T	G	H	A	I	G	I	E	V	H	E	D	P	R	F	S	P	R	D	T	T	T	L	Q	P	G	M	L	L	T	V	E	P	G	I	Y	L	P	G	Q	G	.	.	.	.	.	.	.	.	.	G	V	R	I	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	G	I	L	K	G	D	V	D	E	L	I	A	Q	N	A	H	R	P	F	F	M	H	G	L	S	H	W	L	G	L	D	V	H	D	V	G	V	Y	G	Q	D	R	S	R	I	L	E	P	G	M	V	L	T	V	E	P	G	L	Y	I	A	P	D	A	E	V	P	E	Q	Y	R	G	I	G	I	R	I	E
Template Known Secondary structure				T	S	S		S								T	T	T	T	T	T	T			S		S			B		S	S	S	S	S			S				G	G	G						T	T													T	T		S	S		G	G	G	T	T						B
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350		.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		D	V	V	L	V	T	P	Q	G	A	E	V	L	Y	A	.	M	P	K	T	V
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		D	D	I	V	I	T	E	T	G	N	E	N	L	T	A	S	V	V	K	K	P
Template Known Secondary structure								S	S	S				T	T	T	T	S			S
Template Predicted Secondary structure
Template SS confidence
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions