Job Description P32109 Confidence 4.22% Date Thu Jan 5 11:49:10 GMT 2012 Rank 17 Aligned Residues 73 % Identity 19% Template d1m3ya2 SCOP info Nucleoplasmin-like/VP (viral coat and capsid proteins) Group II dsDNA viruses VP Major capsid protein vp54 Resolution 2.00

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		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	N	F	Y	Q	Y	P	L	N	P	V	I	N	V	D	P	Q	G	L	V	D	I	N	L	Y	P	E	S	D	L	I	H	S	V	A	D	E	I	N	I	P	G	V	F	T	I	G	G	H	G	T	P	T	S	I	E	S	A	T	R	S	I	M	T	A	K	D	L	A	Y	L	I	K	F	D	G	N	Y	K
Query Conservation
Alig confidence																.							.	.	.	.	.	.
Template Conservation																.							.	.	.	.	.	.
Template Sequence		G	V	Y	L	Y	S	F	A	L	K	P	A	G	R	.	Q	P	S	G	T	C	.	.	.	.	.	.	N	F	S	R	I	D	N	A	T	L	S	L	T	Y	K	T	C	S	I	D	A	T	S	P	A	A	V	L	G	N	T	E	T	V	T	A	N	T	A	T	L	L	T	A	L	N	I	Y	A	K	N	Y	N
Template Known Secondary structure		T						S	S	S		T	T		S	.	S						.	.	.	.	.	.		T	T	S		S															T	T						T	S			T	T				G	G	G	G	G
Template Predicted Secondary structure																.							.	.	.	.	.	.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.		.	.	.	.	.	.							370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions