Job Description P05852 Confidence 99.67% Date Thu Jan 5 10:59:01 GMT 2012 Rank 11 Aligned Residues 254 % Identity 17% Template d2ewsa1 SCOP info Ribonuclease H-like motif Actin-like ATPase domain Fumble-like Resolution 2.05

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	V	L	G	I	E	T	S	C	D	E	T	G	I	A	I	Y	D	D	E	K	G	L	L	A	N	Q	L	Y	S	Q	V	K	L	H	A	D	Y	G	G	V	V	P	E	L	A	S	R	D	H	V	R	K	T	V	P	L	I	Q	A	A	L	K	E	S	G	L	T	A	K	D	I	D	A	V	A	Y	T	A
Query Conservation
Alig confidence				.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.											.
Template Conservation				.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.											.
Template Sequence		M	K	.	V	G	I	D	A	G	G	T	L	I	K	I	V	Q	E	Q	D	N	Q	R	T	F	K	T	E	L	T	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	Q	V	V	E	W	.	.	L	N	Q	Q	Q	I	E	K	L	C	.	L	T
Template Known Secondary structure				.							S	S									S	S									G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.			T	S			S				.
Template Predicted Secondary structure				.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.											.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.																											.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.		.	50
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.						.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.
Query SS confidence																																												.	.	.	.	.
Query Sequence		G	P	G	L	V	G	A	L	L	V	G	A	T	V	G	R	S	L	A	F	A	W	D	V	P	A	I	P	V	H	H	M	E	G	H	L	L	A	P	M	L	E	.	.	.	.	.	D	N	P	P	E	F	P	F	V	A	L	L	V	S	G	G	H	T	Q	L	I	S	V	T	G	I	G	Q	Y	E	L	L	G
Query Conservation																																												.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.							.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.																																								.	.	.
Template Sequence		G	G	N	.	.	.	.	.	.	.	.	.	.	.	A	G	V	I	A	E	N	I	N	I	P	A	Q	I	F	V	E	F	D	A	A	S	Q	G	L	G	I	L	L	K	E	Q	G	H	D	L	A	D	Y	.	.	.	I	F	A	N	V	G	T	G	T	S	L	H	Y	F	D	G	Q	S	Q	R	R	V	G	G
Template Known Secondary structure		S	T	T	.	.	.	.	.	.	.	.	.	.	.						T	T	S	S	S																						T	T				S			.	.	.						S	S	S								S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.																																								.	.	.
Template SS confidence
		51	.	.												.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.				.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	I	D	D	A	A	G	E	A	F	D	K	T	A	K	L	L	G	L	D	Y	P	G	G	P	L	L	S	K	M	A	A	Q	G	T	A	G	R	F	V	F	P	R	P	M	T	D	R	P	G	L	D	F	S	F	S	G	L	K	T	F	A	A	N	T	I	R	D	N	G	T	D	D	Q	T	R	A	D	I
Query Conservation
Alig confidence							.	.																			.	.																													.	.	.	.	.	.	.
Template Conservation							.	.																			.	.																													.	.	.	.	.	.	.
Template Sequence		I	G	T	G	G	.	.	G	M	I	Q	G	L	G	Y	L	L	S	Q	I	T	D	Y	K	Q	.	.	L	T	D	M	A	Q	H	G	D	R	N	T	I	D	L	K	V	R	H	I	I	P	G	D	L	T	A	A	.	.	.	.	.	.	.	N	F	G	H	V	L	H	H	L	D	A	D	F	T	P	S	N	K
Template Known Secondary structure			S		S		.	.																			.	.						T	T				T	T	T				T	T	T				T	T	S				.	.	.	.	.	.	.	T	T	T	T	G	G	G		T	T	S
Template Predicted Secondary structure							.	.																			.	.																													.	.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.								.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		A	R	A	F	E	D	A	V	V	D	T	L	M	I	K	C	K	R	A	L	D	Q	T	G	F	K	R	L	V	M	A	G	G	V	S	A	N	.	R	T	L	R	A	K	L	A	E	M	M	K	K	R	R	G	E	V	F	Y	A	R	P	E	F	C	T	D	N	G	A	M	I	A	Y	A	G	M	V	R	F	K
Query Conservation																																							.
Alig confidence																																							.																								.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.
Template Sequence		L	A	A	V	I	G	V	V	G	E	V	V	T	T	M	A	I	T	V	A	R	E	F	K	T	E	N	I	V	Y	I	G	S	S	F	H	N	N	A	L	L	R	K	V	V	E	D	Y	T	V	L	R	G	C	K	P	Y	Y	V	E	N	.	.	.	.	.	.	G	A	F	S	G	A	I	G	A	L	Y	L	E
Template Known Secondary structure																								T	T								S	G	G	G	T	T															T	T							T	T	.	.	.	.	.	.	G	G	G									T
Template Predicted Secondary structure																																																															.	.	.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.							.	.	.	.	.	.	260	.	.	.	.	.	.
		315
Predicted Secondary structure
Query SS confidence
Query Sequence		A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		267

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions