Return to main results Retrieve Phyre Job Id

Job DescriptionP05852
Confidence94.05%DateThu Jan 5 10:59:01 GMT 2012
Rank82Aligned Residues91
% Identity13%Templated2ch5a1
SCOP infoRibonuclease H-like motif Actin-like ATPase domain BadF/BadG/BcrA/BcrD-like
Resolution1.9

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   234.....240.........250.........260. ........270.. .......280.........290......... 300...
Predicted Secondary structure 



........
.









.
Query SS confidence 



























. . . . . . . .










.


























.



Query Sequence  DIARAFEDAVVDTLMIKCKRALDQTGFK. . . . . . . . RLVMAGGVSAN. RTLRAKLAEMMKKRRGEVFYARPEFCT. DNGA
Query Conservation 


   
  
   
              ........ 
 





 
.  
   
          
  

     .


 
Alig confidence 



























........










.


























.



Template Conservation    
  

  
   
   
      
            


 


  
           
                    
Template Sequence  PLSRYIFRKAGEMLGRHIVAVLPEIDPVLFQGKIGLPILCVGSVWKSWELLKEGFLLALTQGRAQNFFSSFTLMKLRHSS
Template Known Secondary structure  GGGS
GGGG
STT
SGGGGG



S
SSS
T
Template Predicted Secondary structure 























Template SS confidence 















































































   229230.........240.........250.........260.........270.........280.........290.........300........
 
   304.....310.........320....
Predicted Secondary structure 







Query SS confidence 




















Query Sequence  MIAYAGMVRFKAGATADLGVS
Query Conservation   

         
        
Alig confidence 




















Template Conservation    


 

    
     
  
Template Sequence  ALGGASLGARHIGHLLPMDYS
Template Known Secondary structure  TTT





Template Predicted Secondary structure 





Template SS confidence 




















   312.......320.........330..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions