Job Description P05852 Confidence 99.88% Date Thu Jan 5 10:59:01 GMT 2012 Rank 6 Aligned Residues 257 % Identity 19% Template d1huxa_ SCOP info Ribonuclease H-like motif Actin-like ATPase domain BadF/BadG/BcrA/BcrD-like Resolution 3.00

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	V	L	G	I	E	T	S	C	D	E	T	G	I	A	I	Y	D	D	E	K	G	L	L	A	N	Q	L	Y	S	Q	V	K	L	H	A	D	Y	G	G	V	V	P	E	L	A	S	R	D	H	V	R	K	T	V	P	L	I	Q	A	A	L	K	E	S	G	L	T	A	K	D	I	D	A	V	A	Y	T	A
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Template Sequence		I	Y	T	L	G	I	D	V	G	S	T	A	S	K	C	I	I	L	K	D	G	K	E	I	V	A	K	S	L	V	A	V	.	.	.	.	.	.	.	.	G	T	G	T	S	G	P	A	R	S	.	.	.	.	.	.	.	.	I	S	E	V	L	E	N	A	H	M	K	K	E	D	M	A	F	T	L	A	T	G
Template Known Secondary structure											S	S									T	T	T											.	.	.	.	.	.	.	.		S	S								.	.	.	.	.	.	.	.									T			G	G	G		S						S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.									.	.	.	.	.	40	.	.	.	.									.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		G	P	G	L	V	G	A	L	L	V	G	A	T	V	G	R	S	L	A	F	A	W	D	V	P	A	I	P	V	H	H	M	E	G	H	L	L	A	P	M	L	E	D	N	P	P	E	F	P	F	V	A	L	L	V	S	G	G	H	T	Q	L	I	S	V	T	G	I	G	Q	Y	E	L	L	G	.	E	S	I	D
Query Conservation																																																																													.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.																										.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Sequence		Y	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	S	L	E	G	I	A	D	K	Q	M	S	E	L	S	C	H	A	M	G	A	S	F	I	W	P	N	V	H	.	.	.	T	V	I	D	I	G	G	Q	D	V	K	V	I	H	V	E	N	G	T	M	T	N	F	Q	M	N	D	K	C	A
Template Known Secondary structure		T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T	T	T		S																		T	T			.	.	.							T	T									T	T									S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template SS confidence
		67	.	.																70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	A	G	E	A	F	D	K	T	A	K	L	L	G	L	D	Y	P	G	G	P	L	L	S	K	M	A	A	Q	G	T	A	G	R	F	V	F	P	R	P	M	T	D	R	P	G	L	D	F	S	F	S	G	L	K	T	F	A	A	N	T	I	R	D	N	G	T	D	D	Q	T	R	A	D	I	A	R	A	F
Query Conservation
Alig confidence																						.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	T	G	R	F	L	D	V	M	A	N	I	L	E	V	K	V	S	D	.	.	.	L	A	E	L	G	A	K	S	T	K	R	V	A	I	S	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	T	V	F	A	E	S	E	V	I	S	Q	L	S	K	G	T	D	K	I	D	I	I	A	G	I
Template Known Secondary structure		T	T	S												T			T	T	T	.	.	.						T	T			S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	S														T	T
Template Predicted Secondary structure																						.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.				.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.															.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	A	V	V	D	T	L	M	I	K	C	K	R	A	L	D	Q	T	G	F	K	R	L	V	M	A	G	G	V	S	A	N	R	T	L	R	A	K	L	A	E	M	M	K	K	R	R	G	E	V	F	Y	A	R	P	E	F	C	T	D	N	G	A	M	I	A	Y	A	G	M	V	R	F	K	A	G	A
Query Conservation
Alig confidence																	.	.	.																											.	.	.										.	.	.
Template Conservation																	.	.	.																											.	.	.										.	.	.
Template Sequence		H	R	S	V	A	S	R	V	I	G	L	A	N	R	V	.	.	.	G	I	V	K	D	V	V	M	T	G	G	V	A	Q	N	Y	G	V	R	G	A	L	E	E	G	L	.	.	.	G	V	E	I	K	T	S	P	L	.	.	.	A	Q	Y	N	G	A	L	G	A	A	L	Y	A	Y	K	K	A	A	K
Template Known Secondary structure															T	T	.	.	.				S	S					S	G	G	G	G													.	.	.		S						G	G	.	.	.	G	G	G														T	T
Template Predicted Secondary structure																	.	.	.																											.	.	.										.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.				.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.				.	.	.	.	.	.	.	240	.				.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions