Job Description P05852 Confidence 96.98% Date Thu Jan 5 10:59:01 GMT 2012 Rank 60 Aligned Residues 265 % Identity 10% Template c3vgkB_ PDB info PDB header:transferase Chain: B: PDB Molecule:glucokinase; PDBTitle: crystal structure of a rok family glucokinase from streptomyces2 griseus Resolution 3.25 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	L	G	I	E	T	S	C	D	E	T	G	I	A	I	Y	D	D	E	K	G	L	L	A	N	Q	L	Y	S	Q	V	K	L	H	A	D	Y	G	G	V	V	P	E	L	A	S	R	D	H	V	R	K	T	V	P	L	I	Q	A	A	L	K	E	S	G	L	T	A	K	D	I	D	A	V	A	Y	T	A	G
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Sequence		L	T	I	G	V	D	I	G	G	T	K	I	A	A	G	V	V	D	E	E	G	R	I	L	S	T	F	K	V	A	T	P	P	T	A	E	G	I	.	.	.	.	.	.	.	.	.	.	.	.	V	D	A	I	C	A	A	V	A	G	A	S	E	G	H	D	.	.	.	.	.	V	E	A	V	G	I	G	A	A
Template Known Secondary structure										T	T									T	T													S	S	S	S	T		.	.	.	.	.	.	.	.	.	.	.	.												T	T	T			.	.	.	.	.									S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40													.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.
		82											.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.
Query Sequence		P	.	.	.	.	.	.	.	.	.	.	G	L	V	G	A	L	L	V	G	A	T	V	G	R	S	L	A	F	A	W	D	V	P	A	I	P	V	H	H	M	E	G	H	L	L	A	P	M	L	E	D	N	P	P	E	F	P	F	V	A	L	L	V	S	G	G	H	T	Q	L	I	S	V	T	G	I	G	Q	Y
Query Conservation			.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	Y	V	D	D	K	R	A	T	V	L	F	A	P	N	I	D	W	R	H	E	P	L	K	D	K	V	E	Q	R	V	G	L	P	V	V	V	E	N	D	A	N	A	A	A	W	G	E	Y	R	F	G	A	G	Q	G	H	D	D	V	I	C	I	T	L	G	T	G	L	G	G	G	I	I	I	G	N	K	L	R
Template Known Secondary structure		S				T	T	S							S	S	S																	S																		T	S	T	T	S	S		S	S							S	S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		152	.	.	.	.	.	.	.	160																										.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	L	G	E	S	I	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	G	E	A	F	D	K	T	A	K	L	L	G	L	D	Y	P	G	G	P	L	L	S	K	M	A	A	Q	G	T	A	G	R	F	V	F	P	R	P	M	T	D	R	P	G
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	G	R	F	G	V	A	A	E	F	G	H	I	R	V	V	P	D	G	L	L	C	G	C	G	S	Q	G	C	W	E	Q	Y	A	S	G	R	A	L	V	R	Y	A	K	Q	R	A	N	A	T	P	E	N	A	A	V	L	L	G	L	G	D	G	S	V	D	G	I	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S	S	S					G	G	G	S	B		S	T	T		S	B		T	T	S	S	B		B	G	G	G	T	S	S																G	G	G								S	S	S	S	T	T			.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		L	D	F	S	F	S	G	L	K	T	F	A	A	N	T	I	R	D	N	G	T	D	D	Q	T	R	A	D	I	A	R	A	F	E	D	A	V	V	D	T	L	M	I	K	C	K	R	A	L	D	Q	T	G	F	K	R	L	V	M	A	G	G	V	S	A	.	N	R	T	L	R	A	K	L	A	E	M	M	K	K
Query Conservation																																																																			.
Alig confidence		.	.	.	.	.	.	.															.	.	.	.	.	.	.																																						.
Template Conservation		.	.	.	.	.	.	.															.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	E	G	K	H	I	S	E	A	A	R	Q	G	D	P	.	.	.	.	.	.	.	V	A	V	D	S	F	R	E	L	A	R	W	A	G	A	G	L	A	D	L	A	S	L	F	D	P	S	A	F	I	V	G	G	G	V	S	D	E	G	E	L	V	L	D	P	I	R	K	S	F	R	R
Template Known Secondary structure		.	.	.	.	.	.	.										T	T	T			.	.	.	.	.	.	.																											S						S	T	T	G	G	G	T
Template Predicted Secondary structure		.	.	.	.	.	.	.															.	.	.	.	.	.	.
Template SS confidence
									214	.	.	.	.	.	220	.	.	.	.	.	.	.								.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
										286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	R	R	G	E	V	F	Y	A	R	P	E	F	C	T	D	N	G	A	M	I	A	Y	A	G	M	V	R
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.											.	.	.
Template Conservation																				.	.	.
Template Sequence		W	L	I	G	G	E	W	R	P	H	A	Q	V	L	A	A	Q	L	.	.	.	G	G	K	A	G	L	V	G	A	A	D	L	A	R
Template Known Secondary structure				S	S	T	T	T	S									S	S	.	.	.	G	G	G										T	T
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.				.	.	300	.	.	.	.	.	.	.	.	.	310	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions