Job Description P05852 Confidence 98.06% Date Thu Jan 5 10:59:01 GMT 2012 Rank 31 Aligned Residues 203 % Identity 16% Template c3smpA_ PDB info PDB header:transferase Chain: A: PDB Molecule:pantothenate kinase 1; PDBTitle: monoclinic crystal structure of human pantothenate kinase 1 alpha Resolution 1.90 Å

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.																										.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	T	V	G	R	S	L	A	F	A	W	D	V	P	A	I	P	V	H	H	M	E	G	H	L	L	A	P	M	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	N	P	P	E	F	P	F	V	A	L	L	V	S	G	G	H	T	Q	L	I	S	V
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																																																																								.
Template Sequence		A	F	K	F	E	E	D	F	R	M	I	A	D	L	Q	L	H	K	L	D	E	L	D	C	L	I	Q	G	L	L	Y	V	D	S	V	G	F	N	G	K	P	E	C	Y	Y	F	E	N	P	T	N	P	E	L	C	Q	K	K	P	Y	C	P	Y	P	M	L	L	V	N	M	.	G	S	G	V	S	I	L	A	V
Template Known Secondary structure																																						B	T	T	B		S						S	T	T		T	T	T										S							.	S	S	S
Template Predicted Secondary structure																																																																								.
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.		.	.	.	.	.	.	.	420	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.											.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																																.																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.																						.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	I	G	Q	Y	E	L	L	G	E	S	I	D	D	A	A	G	E	A	F	D	K	T	A	K	L	L	G	L	.	D	Y	P	G	G	P	L	L	S	K	M	A	A	Q	G	T	A	G	R	F	V	.	.	.	.	.	.	.	.	.	.	F	P	R	P	M	T	D	R	P	G	L	D	F	S	F	S	G	L
Query Conservation																																.																						.	.	.	.	.	.	.	.	.	.
Alig confidence															.																	.					.	.	.															.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation															.																						.	.	.																																								.	.	.
Template Sequence		Y	S	K	D	N	Y	K	R	V	T	G	T	S	.	L	G	G	G	T	F	L	G	L	C	C	L	L	T	G	C	E	T	F	E	E	.	.	.	A	L	E	M	A	A	K	G	D	S	T	N	V	D	K	L	V	K	D	I	Y	G	G	D	Y	E	R	F	G	L	Q	G	S	A	V	A	S	S	F	.	.	.
Template Known Secondary structure				T	T									S	.		S																S				.	.	.										G	G	G	T	S								S	S		B	G	G	G	T	B		T	T	S				T	T	.	.	.
Template Predicted Secondary structure															.																						.	.	.																																								.	.	.
Template SS confidence
		425	.	.	.	.	430	.	.	.	.	.	.	.		.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.				.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.				.	.	.	.	290
Predicted Secondary structure																																																								.																		.	.	.
Query SS confidence																																																								.																		.	.	.
Query Sequence		K	T	F	A	A	N	T	I	R	D	N	G	T	D	D	Q	T	R	A	D	I	A	R	A	F	E	D	A	V	V	D	T	L	M	I	K	C	K	R	A	L	D	Q	T	G	F	K	R	L	V	M	A	G	G	.	V	S	A	N	R	T	L	R	A	K	L	A	E	M	M	K	K	.	.	.	R	R	G	E	V
Query Conservation																																																								.																		.	.	.
Alig confidence		.	.	.	.																																																			.																		.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	G	N	M	M	S	K	E	K	R	D	S	I	S	K	E	D	L	A	R	A	T	L	V	T	I	T	N	N	I	G	S	I	A	R	M	C	A	L	N	E	N	I	D	R	V	V	F	V	G	N	F	L	R	I	N	M	V	S	M	K	L	L	A	Y	A	M	D	F	W	S	K	G	Q	L	K	A
Template Known Secondary structure		.	.	.	.	G	G	G	G	S																																				T								S	G	G	G	T	S		T														T	T	T	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						498	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Y	A	R	P	E	F	C	T	D	N	G	A	M	I	A	Y	A
Query Conservation
Alig confidence							.	.	.
Template Conservation							.	.	.
Template Sequence		L	F	L	E	H	.	.	.	E	G	Y	F	G	A	V	G	A	L
Template Known Secondary structure		B			T	T	.	.	.	T	T
Template Predicted Secondary structure							.	.	.
Template SS confidence
		574	.	.	.	.				.	580	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions