Job Description P05852 Confidence 99.85% Date Thu Jan 5 10:59:01 GMT 2012 Rank 7 Aligned Residues 150 % Identity 23% Template c3r6mD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:yeaz, resuscitation promoting factor; PDBTitle: crystal structure of vibrio parahaemolyticus yeaz Resolution 3.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	L	G	I	E	T	S	C	D	E	T	G	I	A	I	Y	D	D	E	K	G	L	L	A	N	Q	L	Y	S	Q	V	K	L	H	A	D	Y	G	G	V	V	P	E	L	A	S	R	D	H	V	R	K	T	V	P	L	I	Q	A	A	L	K	E	S	G	L	T	A	K	D	I	D	A	V	A	Y	T	A	G
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	L	A	I	D	T	A	T	E	N	C	S	V	A	L	L	V	N	D	Q	V	I	S	R	S	E	V	A	P	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	T	K	K	V	L	P	M	V	D	E	V	L	K	E	A	G	L	T	L	Q	D	L	D	A	L	A	F	G	R	G
Template Known Secondary structure									S	S	S									S	S											S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	T	T			T	T	T		S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.																		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		P	G	L	V	G	A	L	L	V	G	A	T	V	G	R	S	L	A	F	A	W	D	V	P	A	I	P	V	H	H	M	E	G	H	L	L	A	P	M	L	E	D	N	P	P	E	F	P	F	V	A	L	L	V	S	G	G	H	.	.	T	Q	L	I	S	V	T	G	I	G	Q	Y	E	L	L	G	E	S	I	D
Query Conservation																																																												.	.
Alig confidence																																													.															.	.
Template Conservation																																													.
Template Sequence		P	G	S	F	T	G	V	R	I	G	I	G	I	A	Q	G	L	A	F	G	A	E	L	P	M	I	G	V	S	T	L	A	A	M	A	Q	A	S	Y	R	L	H	G	.	A	T	D	V	A	V	A	I	D	A	R	M	S	E	V	Y	W	A	R	Y	S	R	Q	E	N	G	E	W	I	G	V	D	E	E	C	V
Template Known Secondary structure		S	S																			T	T																						.		S									S	T	T											T	T	S
Template Predicted Secondary structure																																													.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	A	G	E	A	F	D	K	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	P	P	A	R	L	A	E	E	A
Template Known Secondary structure										S
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions