Job Description P05852 Confidence 98.56% Date Thu Jan 5 10:59:01 GMT 2012 Rank 21 Aligned Residues 261 % Identity 12% Template c3eo3B_ PDB info PDB header:isomerase, transferase Chain: B: PDB Molecule:bifunctional udp-n-acetylglucosamine 2-epimerase/n- PDBTitle: crystal structure of the n-acetylmannosamine kinase domain of human2 gne protein Resolution 2.84 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	V	L	G	I	E	T	S	C	D	E	T	G	I	A	I	Y	D	D	E	K	G	L	L	A	N	Q	L	Y	S	Q	V	K	L	H	A	D	Y	G	G	V	V	P	E	L	A	S	R	D	H	V	R	K	T	V	P	L	I	Q	A	A	L	K	E	S	G	L	T	A	K	D	I	D	A	V	A	Y	T	A
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	A	L	A	V	D	L	G	G	T	N	L	R	V	A	I	V	S	M	K	G	E	I	V	K	K	Y	T	Q	F	N	P	K	T	Y	E	E	R	.	.	.	.	.	.	.	.	.	.	.	.	I	N	L	I	L	Q	M	C	V	E	A	A	A	E	A	V	K	L	N	C	R	I	L	G	V	G	I	S	T
Template Known Secondary structure											S	S	S								T	T													S	S					.	.	.	.	.	.	.	.	.	.	.	.																		T	T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.													.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		G	P	G	L	V	G	A	L	L	V	G	A	T	V	G	R	S	L	A	F	A	W	D	V	P	A	I	P	V	H	H	M	E	G	H	L	L	A	P	M	L	E	D	N	P	P	E	F	P	F	V	A	L	L	V	S	G	G	H	T	Q	L	I	S	V	T	G	I	G	Q	Y	E	L	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.																																																													.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	.	.	.	.	.	.	.	.	.	.	.	.	L	R	T	P	L	S	D	T	L	H	L	P	V	W	V	D	N	D	G	N	C	A	A	L	A	E	R	K	F	G	Q	G	K	G	L	E	N	F	V	T	L	I	T	G	T	G	I	G	G	G	I	I	H	Q	H	E	L	I	H	G	S	S	F	C	A	A	E
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.											S																		T	S	T	T	T	T		S	S							S	S	S								T	T						T	T	S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		499													500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
											154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	L	G	E	S	I	D	D	A	A	G	E	A	F	D	K	T	A	K	L	L	G	L	D	Y	P	G	G	P	L	L	S	K	M	A	A	Q	G	T	A	G	R	F	V	F	P	R	P	M	T	D	R	P	G	L	D	F	S	F	S	G	L	K	T	F	A	A	N	T	I	R	D
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template Sequence		L	G	H	L	V	V	S	L	D	G	P	D	C	S	C	G	S	H	G	C	I	E	A	Y	A	S	G	M	A	.	.	.	.	.	.	.	.	.	L	Q	R	E	A	K	K	L	H	D	E	D	L	L	L	V	E	G	M	S	A	V	.	.	.	.	.	.	.	.	.	G	A	L	H	L	I	Q	A	A	K	L
Template Known Secondary structure		G	G	G		B			S	S			B		T	T	S		B	S	B						S				.	.	.	.	.	.	.	.	.											T	T		S			S	S					.	.	.	.	.	.	.	.	.											T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template SS confidence
		567	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.										.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.										.	.	620	.	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																																																		.	.
Query SS confidence																																																		.	.
Query Sequence		N	G	T	D	D	Q	T	R	A	D	I	A	R	A	F	E	D	A	V	V	D	T	L	M	I	K	C	K	R	A	L	D	Q	T	G	F	K	R	L	V	M	A	G	G	V	S	A	N	.	.	R	T	L	R	A	K	L	A	E	M	M	K	K	R	R	G	E	V	F	Y	A	R	P	E	F	C	T	D	N	G
Query Conservation																																																		.	.
Alig confidence					.	.	.	.	.	.	.																																							.	.																										.
Template Conservation					.	.	.	.	.	.	.																																																																		.
Template Sequence		G	N	A	.	.	.	.	.	.	.	K	A	Q	S	I	L	R	T	A	G	T	A	L	G	L	G	V	V	N	I	L	H	T	M	N	P	S	L	V	I	L	S	G	V	L	A	S	H	Y	I	H	I	V	K	D	V	I	R	Q	Q	A	L	S	S	V	Q	D	V	D	V	V	V	S	D	L	.	V	D	P	A
Template Known Secondary structure		T			.	.	.	.	.	.	.																											S						S	T	T																S		G	G	G	T	T									.	S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.																																																																		.
Template SS confidence
		634	.	.								.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.		.	.	.	.
		303	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	I	A	Y	A	G	M	V	R
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		L	.	L	G	A	A	S	M	V	L
Template Known Secondary structure			.
Template Predicted Secondary structure			.
Template SS confidence
		706		.	.	.	710	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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