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Job DescriptionP05852
Confidence100.00%DateThu Jan 5 10:59:01 GMT 2012
Rank3Aligned Residues322
% Identity33%Templatec3enoB_
PDB info PDB header:hydrolase/unknown functionChain: B: PDB Molecule:putative o-sialoglycoprotein endopeptidase; PDBTitle: crystal structure of pyrococcus furiosus pcc1 in complex2 with thermoplasma acidophilum kae1
Resolution3.02 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MRVLGIETSCDETGIAIYDDEKGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQAALKESGLTAKDIDAVAYTA
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Template Sequence  MIVLGLEGTAHTISCGIIDESRILAMESSMYR. . . . PKTGGIRPLDAAVHHSEVIDTVISRALEKAKISIHDIDLIGFSM
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SSS
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   1........10.........20.........30.. .......40.........50.........60.........70......
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  GPGLVGALLVGATVGRSLAFAWDVPAIPVHHMEGHLLAPMLEDNPPEFPFVALLVSGGHTQLISVTGIGQYELLGESIDD
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Template Sequence  GPGLAPSLRVTATAARTISVLTGKPIIGVNHPLGHIEIGRRVTGAIDP. . VMLYVSGGNTQVIAH. VNGRYRVLGETLDI
Template Known Secondary structure  SSS
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   77..80.........90.........100.........110.........120.... .....130......... 140.........150...
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  AAGEAFDKTAKLLGLDYPGGPLLSKMAAQGTAGRFVFPRPMTDRPGLDFSFSGLKTFAANTIRDNGTDDQTRADIARAFE
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Template Sequence  GIGNMIDKFAREAGIPFPGGPEIEKLAMKGTKL. LDLPYSVK. . . GMDTAFSGILTAALQYLKTG. . . . QAIEDISYSIQ
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TTTT

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   154.....160.........170.........180...... ...190.... .....200.........210.... .....220.....
 
   241........250.........260.........270.........280.........290.........300.........310.........320
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Query Sequence  DAVVDTLMIKCKRALDQTGFKRLVMAGGVSANRTLRAKLAEMMKKRRGEVFYARPEFCTDNGAMIAYAGMVRFKAGATAD
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Template Sequence  ETAFAMLVEVLERALYVSGKDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSGVRMS
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SSSGGG
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   226...230.........240.........250.........260.........270.........280.........290.........300.....
 
   321. .......330.......
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Query Sequence  LG. VSVRPRWPLAELPAA
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Template Sequence  VEETAVNPRFRIDEVDAP
Template Known Secondary structure  GGG



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   306...310.........320...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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