Job Description P05852 Confidence 100.00% Date Thu Jan 5 10:59:01 GMT 2012 Rank 1 Aligned Residues 318 % Identity 32% Template c3en9B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:o-sialoglycoprotein endopeptidase/protein kinase; PDBTitle: structure of the methanococcus jannaschii kae1-bud32 fusion2 protein Resolution 2.67 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	V	L	G	I	E	T	S	C	D	E	T	G	I	A	I	Y	D	D	E	K	G	L	L	A	N	Q	L	Y	S	Q	V	K	L	H	A	D	Y	G	G	V	V	P	E	L	A	S	R	D	H	V	R	K	T	V	P	L	I	Q	A	A	L	K	E	S	G	L	T	A	K	D	I	D	A	V	A	Y	T	A
Query Conservation
Alig confidence																																		.	.	.	.	.	.																											.	.
Template Conservation																																		.	.	.	.	.	.																											.	.
Template Sequence		M	I	C	L	G	L	E	G	T	A	E	K	T	G	V	G	I	V	T	S	D	G	E	V	L	F	N	K	T	I	M	Y	.	.	.	.	.	.	K	P	G	I	N	P	R	E	A	A	D	H	H	A	E	T	F	P	K	L	I	K	E	A	F	E	.	.	V	V	D	K	N	E	I	D	L	I	A	F	S	Q
Template Known Secondary structure										S	S	S									T	T	S											.	.	.	.	.	.																										T	.	.	T	S		G	G	G
Template Predicted Secondary structure																																		.	.	.	.	.	.																											.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.							.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	G	L	V	G	A	L	L	V	G	A	T	V	G	R	S	L	A	F	A	W	D	V	P	A	I	P	V	H	H	M	E	G	H	L	L	A	P	M	L	E	D	N	P	P	E	F	P	F	V	A	L	L	V	S	G	G	H	T	Q	L	I	S	V	T	G	I	G	Q	Y	E	L	L	G	E	S	I	D	D
Query Conservation
Alig confidence																																																		.	.																		.
Template Conservation																																																		.	.																		.
Template Sequence		G	P	G	L	G	P	S	L	R	V	T	A	T	V	A	R	T	L	S	L	T	L	K	K	P	I	I	G	V	N	H	C	I	A	H	I	E	I	G	K	L	T	T	E	A	E	D	P	.	.	L	T	L	Y	V	S	G	G	N	T	Q	V	I	A	Y	V	S	.	K	K	Y	R	V	F	G	E	T	L	D	I
Template Known Secondary structure			S	S																			T	T																			S	S	S		S	S		.	.						S	S	S									T	.	T								B	S	S	S
Template Predicted Secondary structure																																																		.	.																		.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	G	E	A	F	D	K	T	A	K	L	L	G	L	D	Y	P	G	G	P	L	L	S	K	M	A	A	Q	G	T	A	G	R	F	V	F	P	R	P	M	T	D	R	P	G	L	D	F	S	F	S	G	L	K	T	F	A	A	N	T	I	R	D	N	G	T	D	D	Q	T	R	A	D	I	A	R	A	F	E
Query Conservation
Alig confidence																																	.										.	.	.																						.	.	.	.
Template Conservation																																	.										.	.	.																						.	.	.	.
Template Sequence		A	V	G	N	C	L	D	Q	F	A	R	Y	V	N	L	P	H	P	G	G	P	Y	I	E	E	L	A	R	K	G	K	.	K	L	V	D	L	P	Y	T	V	.	.	.	K	G	M	D	I	A	F	S	G	L	L	T	A	A	M	R	A	Y	D	A	G	.	.	.	.	E	R	L	E	D	I	C	Y	S	L	Q
Template Known Secondary structure														T	T			S	S											T			.	S									.	.	.		T	T																	T	T	.	.	.	.
Template Predicted Secondary structure																																	.										.	.	.																						.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.				.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	V	V	D	T	L	M	I	K	C	K	R	A	L	D	Q	T	G	F	K	R	L	V	M	A	G	G	V	S	A	N	R	T	L	R	A	K	L	A	E	M	M	K	K	R	R	G	E	V	F	Y	A	R	P	E	F	C	T	D	N	G	A	M	I	A	Y	A	G	M	V	R	F	K	A	G	A	T	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Y	A	F	S	M	L	T	E	I	T	E	R	A	L	A	H	T	N	K	G	E	V	M	L	V	G	G	V	A	A	N	N	R	L	R	E	M	L	K	A	M	C	E	G	Q	N	V	D	F	Y	V	P	P	K	E	F	C	G	D	N	G	A	M	I	A	W	L	G	L	L	M	H	K	N	G	R	W	M	S
Template Known Secondary structure																				T		S						S	G	G	G	G														T	T	T												S	S															T	S			B
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		321	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		L	G	.	V	S	V	R	P	R	W	P	L	A	E	L	P	A	A
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		L	D	E	T	K	I	I	P	N	Y	R	T	D	M	V	E	V	N
Template Known Secondary structure		T	G	G	G				T	T			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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