Job Description P05852 Confidence 97.75% Date Thu Jan 5 10:59:01 GMT 2012 Rank 41 Aligned Residues 228 % Identity 13% Template c2i7pA_ PDB info PDB header:transferase Chain: A: PDB Molecule:pantothenate kinase 3; PDBTitle: crystal structure of human pank3 in complex with accoa Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		59	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure							.	.																																																																					.	.	.	.	.
Query SS confidence							.	.																																																																					.	.	.	.	.
Query Sequence		I	Q	A	A	L	.	.	K	E	S	G	L	T	A	K	D	I	D	A	V	A	Y	T	A	G	P	G	L	V	G	A	L	L	V	G	A	T	V	G	R	S	L	A	F	A	W	D	V	P	A	I	P	V	H	H	M	E	G	H	L	L	A	P	M	L	E	D	N	P	P	E	F	P	F	V	.	.	.	.	.
Query Conservation							.	.																																																																					.	.	.	.	.
Alig confidence							.	.																			.	.	.	.	.	.	.	.																																											.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.
Template Sequence		L	P	T	F	I	Q	M	G	R	D	K	N	F	S	T	L	Q	T	V	L	C	A	T	G	G	.	.	.	.	.	.	.	.	G	A	Y	K	F	E	K	D	F	R	T	I	G	N	L	H	L	H	K	L	D	E	L	D	C	L	V	K	G	L	L	Y	I	D	S	V	Q	A	E	C	Y	Y	F	A	N	A	S
Template Known Secondary structure												T	T		G	G	G	S	S					B	S	T	.	.	.	.	.	.	.	.	T										T	T																											S						T	T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.									.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
																				132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	L	V	S	G	G	H	T	Q	L	I	S	V	T	G	I	G	Q	Y	E	L	L	G	E	S	I	D	D	A	A	G	E	A	F	D	K	T	A	K	L	L	G	L	.	D	Y	P	G	G	P	L	L	S	K	M	A	A	Q	G	T	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.																	.					.	.	.
Template Conservation																																															.																						.	.	.
Template Sequence		E	P	E	R	C	Q	K	M	P	F	N	L	D	D	P	Y	P	L	L	V	V	N	I	G	S	G	V	S	I	L	A	V	H	S	K	D	N	Y	K	R	V	T	G	T	S	.	L	G	G	G	T	F	L	G	L	C	S	L	L	T	G	C	E	S	F	E	E	.	.	.	A	L	E	M	A	S	K	G	D	S
Template Known Secondary structure			T	T	T										S			S							S	S	S									T	T									S	.		S												T				S				.	.	.										G
Template Predicted Secondary structure																																															.																						.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.				.	.	.	.	.	.	240	.	.	.
		193	.	.	.											.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.
Query Sequence		G	R	F	V	.	.	.	.	.	.	.	.	.	.	F	P	R	P	M	T	D	R	P	G	L	D	F	S	F	S	G	L	K	T	F	A	A	N	T	I	R	D	N	G	T	D	D	Q	T	R	A	D	I	A	R	A	F	E	D	A	V	V	D	T	L	M	I	K	C	K	R	A	L	D	Q	T	G	F	K	R
Query Conservation						.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.
Template Sequence		T	Q	A	D	K	L	V	R	D	I	Y	G	G	D	Y	E	R	F	G	L	P	G	W	A	V	A	S	S	F	G	N	M	I	Y	K	E	K	R	E	S	.	.	.	.	.	.	.	V	S	K	E	D	L	A	R	A	T	L	V	T	I	T	N	N	I	G	S	V	A	R	M	C	A	V	N	E	K	I	N	R
Template Known Secondary structure		G	G	T	S								S	S		B	G	G	G	T	B		T	T	S				T	T	G	G	G	G	S							.	.	.	.	.	.	.																														T
Template Predicted Secondary structure																																										.	.	.	.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.								.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		263	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.				.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure								.																		.	.	.
Query SS confidence								.																		.	.	.
Query Sequence		L	V	M	A	G	G	.	V	S	A	N	R	T	L	R	A	K	L	A	E	M	M	K	K	.	.	.	R	R	G	E	V	F	Y	A	R	P	E	F	C	T	D	N	G	A	M	I	A	Y	A
Query Conservation								.																		.	.	.
Alig confidence								.																		.	.	.											.	.	.
Template Conservation																																							.	.	.
Template Sequence		V	V	F	V	G	N	F	L	R	V	N	T	L	S	M	K	L	L	A	Y	A	L	D	Y	W	S	K	G	Q	L	K	A	L	F	L	E	H	.	.	.	E	G	Y	F	G	A	V	G	A	L
Template Known Secondary structure						S	G	G	G	S	S																T	T	T	S							T	T	.	.	.	G	G	G
Template Predicted Secondary structure																																							.	.	.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.				.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions