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Job DescriptionP05852
Confidence97.61%DateThu Jan 5 10:59:01 GMT 2012
Rank44Aligned Residues246
% Identity12%Templatec2gupA_
PDB info PDB header:transferaseChain: A: PDB Molecule:rok family protein; PDBTitle: structural genomics, the crystal structure of a rok family protein2 from streptococcus pneumoniae tigr4 in complex with sucrose
Resolution2.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  VLGIETSCDETGIAIYDDEKGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQAALKESGLTAKDIDAVAYTAGP
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Template Sequence  IATIDIGGTGIKFASLTPDGKILDKTSISTPE. . . . . . . . . . . . . . . . NLEDLLAWLDQRLSEQ. . . . . DYSGIAXSV. P
Template Known Secondary structure  TT
TT




S................STTS.....

S.S
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   3......10.........20.........30.... .....40.........50 ......... 60
 
   83..... .90.........100.........110.........120.........130.........140.........150.
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Query Sequence  GLVGAL. . . . . . . . . . . LVGATVGRSLAFAWDVPAIPVHHMEGHLLAPMLEDNPPEFPFVALLVSGGHTQLISVTGIGQY
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Template Sequence  GAVNQETGVIDGFSAVPYIHGFSWYEALSSYQLPVHLENDANCVGLSELLAHPELEN. . AACVVIGTGIGGAXIINGRLH
Template Known Secondary structure  S
TTT
BS

SSGGGSSSBTGGG



TT
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   61........70.........80.........90.........100.........110....... ..120.........130........
 
   152.......160 .........170.........180.........190.........200.........210.
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Query Sequence  ELLGESIDD. . . . . . . . . . . . . . . . . . . . AAGEAFDKTAKLLGLDYPGGPLLSKMAAQGTAGRFVFPRPMTDRPGLDFSF
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Template Sequence  RGRHGLGGEFGYXTTLAPAEKLNNWSQLASTGNXVRYVIEKSGHTDWDGRKIYQEAAAGNI. . . . . . . . . . . . . . . . . . .
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TTS
TT
GGG
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   139140.........150.........160.........170.........180.........190.........
 
   212.......220.........230.........240.........250.........260.........270.........280.....
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Query Sequence  SGLKTFAANTIRDNGTDDQTRADIARAFEDAVVDTLMIKCKRALDQTGFKRLVMAGGVSANRTLRAKLAEMMKK. . . . . .
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . LCQEAIERXNRNLAQGLLNIQYLIDPGVISLGGSISQNPDFIQGVKKAVEDFVDAYE
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SSGGGG

T
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   200.........210.........220.........230.........240.........250......
 
   286...290.........300.........310.......
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Query Sequence  . . . RRGEVFYARPEFCTDNGAMIAYAGMVRFKAGA
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Template Sequence  EYTVAPVIQACT. . . YHADANLYGALVNWLQEEKQ
Template Known Secondary structure  T

S



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STTTT
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   257..260........ .270.........280........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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