Job Description P05852 Confidence 98.34% Date Thu Jan 5 10:59:01 GMT 2012 Rank 28 Aligned Residues 297 % Identity 11% Template c2ch5D_ PDB info PDB header:transferase Chain: D: PDB Molecule:nagk protein; PDBTitle: crystal structure of human n-acetylglucosamine kinase in2 complex with n-acetylglucosamine Resolution 1.9 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.								.
Query SS confidence																																																																									.								.
Query Sequence		M	R	V	L	G	I	E	T	S	C	D	E	T	G	I	A	I	Y	D	D	E	K	G	L	L	A	N	Q	L	Y	S	Q	V	K	L	H	A	D	Y	G	G	V	V	P	E	L	A	S	R	D	H	V	R	K	T	V	P	L	I	Q	A	A	L	K	E	S	G	L	T	A	K	.	D	I	D	A	V	A	Y	.
Query Conservation																																																																									.								.
Alig confidence																																				.	.	.	.	.	.	.	.																														.								.
Template Conservation																																				.	.	.	.	.	.	.	.
Template Sequence		A	I	Y	G	G	V	E	G	G	G	T	R	S	E	V	L	L	V	S	E	D	G	K	I	L	A	E	A	D	G	L	S	T	N	.	.	.	.	.	.	.	.	H	W	L	I	G	T	D	K	C	V	E	R	I	N	E	M	V	N	R	A	K	R	K	A	G	V	D	P	L	V	P	L	R	S	L	G	L	S
Template Known Secondary structure											T	T									T	T	S													.	.	.	.	.	.	.	.																									T			T	T			B	S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.									.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		T	A	G	P	G	L	V	G	A	L	L	V	G	A	T	V	G	R	S	L	A	F	A	W	D	V	P	A	I	P	V	H	H	M	E	G	H	L	L	A	P	M	L	E	D	N	P	P	E	F	P	F	V	A	L	L	V	S	G	G	H	T	Q	L	I	S	V	T	G	I	G	Q	Y	E	L	L	G	E	.	.
Query Conservation																																																																																.	.
Alig confidence																																																.	.	.	.	.	.	.																										.	.
Template Conservation																																																.	.	.	.	.	.	.
Template Sequence		L	S	G	G	D	Q	E	D	A	G	R	I	L	I	E	E	L	R	D	R	F	P	Y	L	S	E	S	Y	L	I	T	T	D	A	A	G	S	I	A	T	A	T	P	D	G	G	.	.	.	.	.	.	.	V	V	L	I	S	G	T	G	S	N	C	R	L	I	N	P	D	G	S	E	S	G	C	G	G	W	G
Template Known Secondary structure			T	T	T	T																	T	T	S	B	S																	S	S			.	.	.	.	.	.	.						S	S	S								T	T	S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120								.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
					157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.									.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure		.	.	.																				.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																				.	.	.	.	.	.	.	.
Query Sequence		.	.	.	S	I	D	D	A	A	G	E	A	F	D	K	T	A	K	L	L	G	L	.	.	.	.	.	.	.	.	D	Y	P	G	G	P	L	L	S	K	M	A	A	Q	G	T	A	G	R	F	V	F	P	R	P	M	T	D	R	P	G	L	D	F	S	F	S	G	L	K	T	F	A	A	N	T	I	R	D	N
Query Conservation		.	.	.																				.	.	.	.	.	.	.	.
Alig confidence		.	.	.																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	M	M	G	D	E	G	S	A	Y	W	I	A	H	Q	A	V	K	I	V	F	D	S	I	D	N	L	E	A	A	P	H	D	I	G	Y	V	K	Q	A	M	F	H	Y	F	Q	V	P	D	R	L	G	I	L	T	H	L	Y	R	D	F	D	K	C	R	F	A	G	F	C	R	K	I	A	E	G	A	Q	Q	G
Template Known Secondary structure		T	T	T			T	T	S																		T	S	S			S	S														T		S	S									T	T	T								T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.									.	.	.	.	.	.	.	270	.	.						.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.											.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.											.	.	.	.	.
Query Sequence		G	T	D	D	Q	T	R	A	D	I	A	R	A	F	E	D	A	V	V	D	T	L	M	I	K	C	K	R	A	L	D	Q	T	G	F	K	R	.	.	.	.	.	.	.	.	L	V	M	A	G	G	V	S	A	N	.	.	.	.	.	R	T	L	R	A	K	L	A	E	M	M	K	K	R	R	G	E	V	F	Y
Query Conservation																																							.	.	.	.	.	.	.	.											.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.											.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.
Template Sequence		D	P	.	.	.	.	.	.	.	L	S	R	Y	I	F	R	K	A	G	E	M	L	G	R	H	I	V	A	V	L	P	E	I	D	P	V	L	F	Q	G	K	I	G	L	P	I	L	C	V	G	S	V	W	K	S	W	E	L	L	K	E	G	F	L	L	A	L	T	Q	G	R	E	I	F	S	S	F	T	L	M
Template Known Secondary structure				.	.	.	.	.	.	.																					G	G	G	S		G	G	G	G		S	S	S								S	G	G	G	G	G
Template Predicted Secondary structure				.	.	.	.	.	.	.
Template SS confidence
		228	.								230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	P	E	F	C	T	D	N	G	A	M	I	A	Y	A	G	M	V	R	F	K	A	G	A	T	A	D	L	G	V	S
Query Conservation
Alig confidence				.	.	.	.	.
Template Conservation				.	.	.	.	.
Template Sequence		K	L	.	.	.	.	.	R	H	S	S	A	L	G	G	A	S	L	G	A	R	H	I	G	H	L	L	P	M	D	Y	S
Template Known Secondary structure				.	.	.	.	.	S	S		T											T	T	T
Template Predicted Secondary structure				.	.	.	.	.
Template SS confidence
		306	.						.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions