Job Description P05852 Confidence 99.78% Date Thu Jan 5 10:59:01 GMT 2012 Rank 9 Aligned Residues 150 % Identity 23% Template c2a6aB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:hypothetical protein tm0874; PDBTitle: crystal structure of glycoprotein endopeptidase (tm0874) from2 thermotoga maritima at 2.50 a resolution Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	V	L	G	I	E	T	S	C	D	E	T	G	I	A	I	Y	D	D	E	K	G	L	L	A	N	Q	L	Y	S	Q	V	K	L	H	A	D	Y	G	G	V	V	P	E	L	A	S	R	D	H	V	R	K	T	V	P	L	I	Q	A	A	L	K	E	S	G	L	T	A	K	D	I	D	A	V	A	Y	T	A
Query Conservation
Alig confidence												.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	N	V	L	A	L	D	T	S	Q	.	R	I	R	I	G	L	R	K	G	E	D	L	F	E	I	S	Y	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	K	H	A	E	I	L	P	V	V	V	K	K	L	L	D	E	L	D	L	K	V	K	D	L	D	V	V	G	V	G	I
Template Known Secondary structure										S	S	.	S								T	T									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	G	G	G													T			G	G	G		S
Template Predicted Secondary structure												.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.																		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	G	L	V	G	A	L	L	V	G	A	T	V	G	R	S	L	A	F	A	W	D	V	P	A	I	P	V	H	H	M	E	G	H	L	L	A	P	M	L	E	D	N	P	P	E	F	P	F	V	A	L	L	V	S	G	G	H	T	Q	L	I	S	V	T	G	I	G	Q	Y	E	L	L	G	E	S	I	D	D
Query Conservation
Alig confidence																																									.	.	.	.
Template Conservation																																									.	.	.	.
Template Sequence		G	P	G	G	L	T	G	L	R	V	G	I	A	T	V	V	G	L	V	S	P	Y	D	I	P	V	A	P	L	N	S	F	E	X	T	A	K	S	C	.	.	.	.	P	A	D	G	V	V	L	V	A	R	R	A	R	K	G	Y	H	Y	C	A	V	Y	L	K	D	K	G	L	N	P	L	K	E	P	S	V	V
Template Known Secondary structure			S	S																	T	T	T	T															T	S	.	.	.	.	S													T	T										S	S	S
Template Predicted Secondary structure																																									.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	G	E	A	F	D	K	T	A	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	D	E	E	L	E	E	I	T	K	E	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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