Job Description P05852 Confidence 97.00% Date Thu Jan 5 10:59:01 GMT 2012 Rank 58 Aligned Residues 261 % Identity 8% Template c1zxoB_ PDB info PDB header:unknown function Chain: B: PDB Molecule:conserved hypothetical protein q8a1p1; PDBTitle: x-ray crystal structure of protein q8a1p1 from bacteroides2 thetaiotaomicron. northeast structural genomics consortium3 target btr25. Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	G	I	E	T	S	C	D	E	T	G	I	A	I	Y	D	D	E	K	G	L	L	A	N	Q	L	Y	S	Q	V	K	L	H	A	D	Y	G	G	V	V	P	E	L	A	S	R	D	H	V	R	K	T	V	P	L	I	Q	A	A	L	K	E	S	G	L	T	A	K	D	I	D	A	V	A	Y	T	A	G	P
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.																.													.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.																.													.
Template Sequence		I	L	I	A	D	S	G	S	T	K	T	D	W	C	V	V	L	N	G	A	V	I	K	R	L	G	T	K	G	I	N	P	F	F	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	E	I	Q	Q	K	L	T	A	S	L	L	P	Q	.	L	P	E	G	K	F	N	A	V	Y	F	Y	.	G	A
Template Known Secondary structure									T	T								S	S	S	S												T	T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	T	G	G	G	.	S		S	S									.		T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.																.													.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.														.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.		.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.					.
Predicted Secondary structure																																																																													.	.	.	.
Query SS confidence																																																																													.	.	.	.
Query Sequence		G	L	V	G	A	L	L	V	G	A	T	V	G	R	S	L	A	F	A	W	D	V	P	A	I	P	V	H	H	M	E	G	H	L	L	A	P	M	L	E	D	N	P	P	E	F	P	F	V	A	L	L	V	S	G	G	H	T	Q	L	I	S	V	T	G	I	G	Q	Y	E	L	L	G	E	S	.	.	.	.	I
Query Conservation																																																																													.	.	.	.
Alig confidence																																												.	.	.	.	.	.																												.	.	.	.
Template Conservation																																												.	.	.	.	.	.
Template Sequence		G	C	T	P	E	K	A	P	V	L	R	R	A	I	A	D	S	L	P	V	I	G	N	I	K	A	N	S	D	X	L	A	A	A	H	G	L	C	G	Q	K	A	.	.	.	.	.	.	G	I	A	C	I	L	G	T	G	S	N	S	C	F	Y	N	G	K	E	I	V	S	N	I	S	P	L	G	F	I	L	G
Template Known Secondary structure		T			T	T	T												S																					T	T	S		.	.	.	.	.	.							S	S	S								S	S	S
Template Predicted Secondary structure																																												.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.							.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		159	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		D	D	A	A	G	E	A	F	.	.	D	K	T	A	K	L	L	G	L	D	Y	P	G	G	P	L	L	S	K	M	A	A	Q	G	T	A	G	R	F	V	F	P	R	P	M	T	D	R	P	G	L	D	F	S	F	S	G	L	K	T	F	A	A	N	T	I	R	D	N	G	T	D	D	Q	T	R	A	D	I	A
Query Conservation										.	.
Alig confidence										.	.																																							.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.
Template Sequence		D	E	G	S	G	A	V	L	G	K	L	L	V	G	D	I	L	K	N	Q	L	P	A	T	L	K	E	E	F	L	K	Q	F	D	L	T	P	P	E	I	I	D	R	V	Y	R	Q	P	.	.	.	.	.	.	.	.	.	F	P	N	R	F	L	A	S	L	S	P	F	I	A	Q	H	L	E	E	P	A	I	R
Template Known Secondary structure			T	T	S													T	T	T		S													T												T	S	S	.	.	.	.	.	.	.	.	.									T						T	T	T	T	S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.										.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	F	E	D	A	V	V	D	T	L	M	I	K	C	K	R	A	L	D	Q	T	G	F	K	R	L	V	M	A	G	G	V	S	A	N	R	T	L	R	A	K	L	A	E	M	M	K	K	R	R	G	E	V	F	Y	A	R	P	E	F
Query Conservation
Alig confidence																				.	.																	.	.
Template Conservation																				.	.																	.	.
Template Sequence		Q	L	V	X	N	S	F	I	A	F	F	R	R	N	V	X	Q	Y	.	.	D	Y	K	Q	Y	P	V	H	F	I	G	S	I	A	Y	C	.	.	Y	K	E	I	L	Q	D	A	A	R	Q	T	G	I	Q	I	G	K	I	L	Q	S	P
Template Known Secondary structure															T	G	G	G	S	.	.		G	G	G	S						S						.	.	T											T	T								S		T
Template Predicted Secondary structure																				.	.																	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.			230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions