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Job DescriptionP05852
Confidence95.26%DateThu Jan 5 10:59:01 GMT 2012
Rank77Aligned Residues231
% Identity15%Templatec1woqB_
PDB info PDB header:transferaseChain: B: PDB Molecule:inorganic polyphosphate/atp-glucomannokinase; PDBTitle: crystal structure of inorganic polyphosphate/atp-glucomannokinase from2 arthrobacter sp. strain km at 1.8 a resolution
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  VLGIETSCDETGIAIYDDEKGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQAALKESGLTAKDIDAVAYTAGP
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Template Sequence  LIGIDIGGTGIKGGIVDLKKGKLLGERFRVPTPQPAT. . . . . . . . PESVAEAVALVVAELSARPEAPAAGSPVGVTFPGI
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SSTTTTSS



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TT

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   14.....20.........30.........40.........50 .........60.........70.........80.....
 
   83......90.........100.........110.........120.........130......... 140....
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Query Sequence  . . . . . . . . . GLVGALLVGATVGRSLAFAWDVPAIPVHHMEGHLLAPMLEDNPPEFPFVALLVSGGH. . . . . . . . . TQLIS
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Template Sequence  IQHGVVHSAANVDKSWLNTDIDALLTARLGRPVEVINDADAAGLAEARYGAGAGVKGTVLVITLGTGIGSAFIFDGKLVP
Template Known Secondary structure  TT


TTS
GGGTT
BTS
STTTT

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   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   145....150.........160.........170.........180.........190.........200.........210.........220....
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Query Sequence  VTGIGQYELLGESIDDAAGEAFDKTAKLLGLDYPGGPLLSKMAAQGTAGRFVFPRPMTDRPGLDFSFSGLKTFAANTIRD
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Template Sequence  NAELGHLEIDGHDAETKASAVAR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T

GGG
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   166...170.........180........
 
   225....230.........240.........250.........260.........270 .........280.........290.........300...
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Query Sequence  NGTDDQTRADIARAFEDAVVDTLMIKCKRALDQTGFKRLVMAGGVS. ANRTLRAKLAEMMKKRRGEVFYARPEFCTDNGA
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Template Sequence  . . . . . . . . . ERDGLSWDEYSVLLQRYFSHVEFLFSPELFIVGGGISKRADEYLPNLRL. . . . . RTPIVPAV. . . LRNEAG
Template Known Secondary structure  .........TT



SSTTGGGGGGTGGG


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T...TGGG
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   189190.........200.........210.........220.........230....... ..240..... ....250.
 
   304.....310.....
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Query Sequence  MIAYAGMVRFKA
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Template Sequence  IVGAAIEIALQH
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   252.......260...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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