Return to main results Retrieve Phyre Job Id

Job DescriptionP39390
Confidence13.93%DateThu Jan 5 12:00:21 GMT 2012
Rank14Aligned Residues32
% Identity22%Templatec3oq9C_
PDB info PDB header:apoptosisChain: C: PDB Molecule:tumor necrosis factor receptor superfamily member 6; PDBTitle: structure of the fas/fadd death domain assembly
Resolution6.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.........
Predicted Secondary structure 




Query SS confidence 
































Query Sequence  QLWQAVRRWRRQMQTRRVLQQMSDERLKDIGLR
Query Conservation   
  
 
 

   





  


  





 
Alig confidence 






















.








Template Conservation 
   

  
    
  

   
 . 

      
Template Sequence  QKVQLLLCWYQSHGKSDAYQDLI. KGLKKAECR
Template Known Secondary structure  S
SSS.TT
S
Template Predicted Secondary structure 





.



Template SS confidence 
































   265....270.........280....... ..290......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions