Return to main results Retrieve Phyre Job Id

Job DescriptionP39390
Confidence10.10%DateThu Jan 5 12:00:21 GMT 2012
Rank26Aligned Residues17
% Identity29%Templatec2eseA_
PDB info PDB header:protein/rna complexChain: A: PDB Molecule:vts1p; PDBTitle: structure of the sam domain of vts1p in complex with rna
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........
Predicted Secondary structure 




Query SS confidence 
















Query Sequence  RVLQQMSDERLKDIGLR
Query Conservation 


  


  





 
Alig confidence 
















Template Conservation    
  

  

  


 
Template Sequence  IELIYLDDETLEKKGVL
Template Known Secondary structure  TT

T

Template Predicted Secondary structure 





Template SS confidence 
















   478.480.........490....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions