Return to main results Retrieve Phyre Job Id

Job DescriptionP39390
Confidence6.04%DateThu Jan 5 12:00:21 GMT 2012
Rank58Aligned Residues15
% Identity27%Templatec2a8vA_
PDB info PDB header:protein/rnaChain: A: PDB Molecule:rna binding domain of rho transcription PDBTitle: rho transcription termination factor/rna complex
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50..
Predicted Secondary structure 




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Query Sequence  MSDERLKDIGLRRED
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Template Conservation 

 
 



 

 

Template Sequence  VSPSQIRRFNLRTGD
Template Known Secondary structure 
T

TT
Template Predicted Secondary structure 








Template SS confidence 














   81........90.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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