Return to main results Retrieve Phyre Job Id

Job DescriptionP41407
Confidence23.59%DateThu Jan 5 12:01:28 GMT 2012
Rank214Aligned Residues89
% Identity13%Templated1sq5a_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Phosphoribulokinase/pantothenate kinase
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  VLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLAANPIPVLDGELVGALRPSDAPLTPRQQEALALSDELIAE
Query Conservation 



 



   
 
  
                
   

    
                                   
Alig confidence 







.


.

.

























....

































Template Conservation 





 
.


.

.
 
  
   
        
  




....
                  
 
 
   
   
  
Template Sequence  IISIAGSV. AVG. KS. TTARVLQALLSRWPEHRRVELITTDG. . . . FLHPNQVLKERGLMKKKGFPESYDMHRLVKFVSD
Template Known Secondary structure 
T.TSS..TTSTT


GGG....GB

T
TT
TTSGGGB
Template Predicted Secondary structure 


.


..




....
















Template SS confidence 















































































   1090....... ..1100 .. .......1110.........1120........ .1130.........1140.........1150.........1160..
 
   84.....90.........100
Predicted Secondary structure 







Query SS confidence 
















Query Sequence  LKAHDVIVIAAPMYNFN
Query Conservation 
  

 

  



   
Alig confidence 







.







Template Conservation 
  
   
.  
 

  
Template Sequence  LKSGVPNV. TAPVYSHL
Template Known Secondary structure  TTT
S
.

TT
Template Predicted Secondary structure 




.





Template SS confidence 
















   1163......1170 ........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions