Job Description P41407 Confidence 99.97% Date Thu Jan 5 12:01:28 GMT 2012 Rank 22 Aligned Residues 152 % Identity 24% Template d1rlia_ SCOP info Flavodoxin-like Flavoproteins Hypothetical protein YwqN Resolution 1.80

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	L	V	L	K	S	S	I	L	A	G	Y	S	Q	S	N	Q	L	S	D	Y	F	V	E	Q	W	R	E	K	H	S	A	D	E	I	T	V	R	D	L	A	A	N	P	I	P	V	L	D	G	E	L	V	G	A	L	R	P	S	D	A	P	L	T	P	R	Q	Q	E	A	L	A	L	S	D	E	L	I	A
Query Conservation
Alig confidence															.												.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.												.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	A	V	I	N	G	G	T	R	S	G	G	.	N	T	D	V	L	A	E	K	A	V	Q	.	.	.	.	.	.	.	G	F	D	A	E	H	I	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	D	S	I	I	E
Template Known Secondary structure								S	S		S	S			.											T	.	.	.	.	.	.	.	T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.												.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.								.	.	.	.	30	.	.	.	.																																	.	.	.	.	.	40	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	K	A	H	D	V	I	V	I	A	A	P	M	Y	N	F	N	I	S	T	Q	L	K	N	Y	F	D	L	V	A	R	A	G	V	T	F	R	Y	T	E	N	G	P	E	G	L	V	T	G	K	K	A	I	V	I	T	S	R	G	G	I	H	K	D	G	P	T	D	L	V	T	P	Y	L	S	T	F	L	G
Query Conservation
Alig confidence																																													.	.																		.
Template Conservation																																													.	.																		.
Template Sequence		R	I	L	Q	C	H	I	L	I	F	A	T	P	I	Y	W	F	G	M	S	G	T	L	K	L	F	I	D	R	W	S	Q	T	L	R	D	P	R	F	P	D	F	K	.	.	Q	Q	M	S	V	K	Q	A	Y	V	I	A	V	G	G	D	N	.	P	K	I	K	G	L	P	L	I	Q	Q	F	E	H	I	F	H
Template Known Secondary structure					T		S									B	T	T	B											T					T	T		T	T	S	T	T			.	.					T	S									S	S		.					T
Template Predicted Secondary structure																																													.	.																		.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		F	I	G	I	T	D	V	K	F	V	F	A	E	G	I	A	Y	G	P	.	E	M	A	A	K	A	Q	S	D	A	K	A	A	I	D	S
Query Conservation																					.
Alig confidence																					.
Template Conservation
Template Sequence		F	M	G	M	S	F	K	G	Y	V	L	G	E	G	N	R	P	G	D	I	L	R	D	H	Q	A	L	S	A	A	S	R	L	L	K	R
Template Known Secondary structure				T												S	S	T	T	G	G	G	G											T	T
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions