Job Description P41407 Confidence 22.08% Date Thu Jan 5 12:01:28 GMT 2012 Rank 222 Aligned Residues 125 % Identity 12% Template c3tozA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: 2.2 angstrom crystal structure of shikimate 5-dehydrogenase from2 listeria monocytogenes in complex with nad. Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.				.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.
Query SS confidence																																																															.	.	.
Query Sequence		S	K	V	L	V	L	K	S	S	I	L	A	G	Y	S	Q	S	N	Q	L	S	D	Y	F	V	E	Q	W	R	E	K	H	S	A	D	E	I	T	V	R	D	L	A	A	N	P	I	P	V	L	D	G	E	L	V	G	A	L	R	P	S	.	.	.	D	A	P	L	T	P	R	Q	Q	E	A	L	A	L	S	D
Query Conservation																																																															.	.	.
Alig confidence															.													.	.	.																																	.	.	.
Template Conservation															.													.	.	.
Template Sequence		T	E	L	I	G	L	I	A	T	P	I	R	H	.	S	L	S	P	T	M	H	N	E	A	F	A	.	.	.	K	L	G	L	D	Y	V	Y	L	A	F	E	V	G	D	K	E	L	K	D	V	V	Q	G	F	R	A	M	N	L	R	G	W	N	V	S	M	P	N	K	T	N	I	H	K	Y	L	D	K	L	S
Template Known Secondary structure										S	S		T	T	.		S											.	.	.			T																									T	T								T	T	S	T	T	T	G	G	G	G		S
Template Predicted Secondary structure															.													.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.				.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	I	A	E	L	K	A	H	D	V	I	V	I	A	A	P	M	Y	N	F	N	I	S	T	Q	L	K	N	Y	F	D	L	V	A	R	A	G	V	T	F	R	Y	T	E	N	G	P	E	G	L	V	T	G	K	K	A	I	V	I	T	S	R	G
Query Conservation
Alig confidence																	.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	A	A	E	L	V	G	A	V	N	T	V	V	N	D	.	D	G	V	L	T	G	H	I	T	D	G	T	G	Y	M	R	A	L	K	E	A	G	H	D	.	.	.	.	.	.	.	.	.	.	.	I	I	G	K	K	M	T	I	C	G	A	G	G
Template Known Secondary structure								T			S						.	T	T																			T	T			.	.	.	.	.	.	.	.	.	.	.		T	T	S								S
Template Predicted Secondary structure																	.																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.												.	.	130	.	.	.	.	.	.	.	.	.	140

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions