Job Description P41407 Confidence 29.45% Date Thu Jan 5 12:01:28 GMT 2012 Rank 190 Aligned Residues 87 % Identity 11% Template c3o8wA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:nitrogen regulatory protein p-ii (glnb-1); PDBTitle: archaeoglobus fulgidus glnk1 Resolution 2.28 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		M	S	K	V	L	V	L	K	S	S	I	L	A	G	Y	S	Q	S	N	Q	L	S	D	Y	F	V	E	Q	W	R	E	K	H	.	S	A	D	E	I	T	V	R	D	L	A	A	N	P	I	P	V	L	D	G	E	L	V	G	A	L	R	P	S	D	A	P	L	T	P	R	Q	Q	E	A	L	A	L	S	D	E
Query Conservation																																			.
Alig confidence										.	.	.					.	.	.	.	.	.													.
Template Conservation										.	.	.					.	.	.	.	.	.
Template Sequence		M	K	M	V	V	A	V	I	.	.	.	R	P	E	K	.	.	.	.	.	.	L	E	C	V	K	K	A	L	E	E	R	G	F	V	G	M	T	V	T	E	V	K	G	R	G	E	Q	K	G	I	R	L	V	D	L	L	Q	K	T	K	V	E	V	V	V	S	D	D	A	V	D	E	V	V	E	A	I	V	S
Template Known Secondary structure										.	.	.		G	G	G	.	.	.	.	.	.										T	T	T																	S																		G	G	G
Template Predicted Secondary structure										.	.	.					.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.				.	10	.	.							.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	A	E	L	K	A	H	D	V	I	V	I	A	A	P	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	R	T	G	K	F	G	D	G	R	I	F	V	I	P	V
Template Known Secondary structure						S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions