Job Description P41407 Confidence 22.36% Date Thu Jan 5 12:01:28 GMT 2012 Rank 220 Aligned Residues 103 % Identity 9% Template c3majA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:dna processing chain a; PDBTitle: crystal structure of putative dna processing protein dpra from2 rhodopseudomonas palustris cga009 Resolution 2.05 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	V	L	V	L	K	S	S	I	L	A	G	Y	S	Q	S	N	Q	L	S	D	Y	F	V	E	Q	W	R	E	K	H	S	A	D	E	I	T	V	R	D	L	A	A	N	P	I	P	V	L	D	G	E	L	V	G	A	L	R	P	S	D	A	P	L	T	P	R	Q	Q	E	A	L	A	L	S	D	E	L	I
Query Conservation
Alig confidence																.																	.	.					.	.
Template Conservation																.																	.	.					.	.
Template Sequence		R	P	X	I	A	I	V	G	S	R	N	A	S	G	.	A	G	L	K	F	A	G	Q	L	A	A	D	L	G	A	A	.	.	G	F	V	V	.	.	I	S	G	L	A	R	G	I	D	Q	A	A	H	R	A	S	L	S	S	G	T	V	A	V	L	A	G	G	H	D	K	I	Y	P	A	E	H	E	D	L	L
Template Known Secondary structure		S									S	S				.																	.	.	T				.	.						T	T										T	T	T							S	S		T	T	S		S	S	G	G	G
Template Predicted Secondary structure																.																	.	.					.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	L	K	A	H	D	V	I	V	I	A	A	P	M	Y	N	F	N	I	S	T	Q	L	K	N	Y	F	D	L
Query Conservation
Alig confidence														.	.
Template Conservation														.	.
Template Sequence		L	D	I	I	Q	T	R	G	A	A	I	S	.	.	E	X	P	L	G	H	V	P	R	G	K	D	F	P	R	R
Template Known Secondary structure							T	T						.	.		S		T	T					T	T
Template Predicted Secondary structure														.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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