Job Description P41407 Confidence 100.00% Date Thu Jan 5 12:01:28 GMT 2012 Rank 10 Aligned Residues 185 % Identity 19% Template c3lcmB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of smu.1420 from streptococcus mutans ua159 Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	K	V	L	V	L	K	S	S	I	L	A	G	Y	S	Q	S	N	Q	L	S	D	Y	F	V	E	Q	W	R	E	K	H	S	A	D	E	I	T	V	R	D	L	A	A	N	P	I	P	V	L	D	G	E	L	V	G	A	L	R	P	S	D	A	P	L	T	P	R	Q	Q	E	A	L	A	L	S	D	E	L
Query Conservation
Alig confidence				.												.																	.	.	.																					.	.	.	.	.	.	.	.
Template Conservation				.												.																	.	.	.																					.	.	.	.	.	.	.	.
Template Sequence		M	K	.	I	L	I	V	Y	T	H	P	N	P	T	.	S	F	N	A	E	I	L	K	Q	V	Q	T	N	L	S	K	.	.	.	E	H	T	V	S	T	L	D	L	Y	A	E	H	F	D	P	V	L	Q	F	.	.	.	.	.	.	.	.	N	E	T	H	K	R	R	D	L	A	K	V	A	E	M	E	K	Y
Template Known Secondary structure				.								S		T	T	.	S													S		T	.	.	.	T	S							T	T	T	T	T								.	.	.	.	.	.	.	.	S	S	S	S		G	G	G	G	G	G		G	G	G
Template Predicted Secondary structure				.												.																	.	.	.																					.	.	.	.	.	.	.	.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.				30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.									50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		I	A	E	L	K	A	H	D	V	I	V	I	A	A	P	M	Y	N	F	N	I	S	T	Q	L	K	N	Y	F	D	L	V	A	R	A	G	V	T	F	R	Y	T	E	N	G	P	E	G	L	V	T	G	K	K	A	I	V	I	T	S	R	G	G	I	H	K	D	G	P	T	.	.	D	L	V	T	P	Y	L	S
Query Conservation																																																																								.	.
Alig confidence																																																																								.	.
Template Conservation
Template Sequence		R	D	L	V	T	W	A	D	H	L	I	F	I	F	P	I	W	W	S	G	M	P	A	I	L	K	G	F	I	D	R	V	F	V	A	D	F	A	Y	S	Y	K	K	V	G	L	E	G	H	L	Q	G	K	S	A	W	I	I	T	T	H	N	T	P	S	F	A	M	P	F	V	Q	D	Y	G	K	V	L	K	K
Template Known Secondary structure									S									B	T	T	B													S		B	T	T	T					S	S	S						T	T										S	S		G	G	G	G	G	G	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		T	F	L	G	F	I	G	I	T	D	V	K	F	V	F	A	E	G	I	A	.	Y	G	P	E	M	A	A	K	A	Q	S	D	A	K	A	A	I	D	S	I
Query Conservation																						.
Alig confidence																						.
Template Conservation
Template Sequence		Q	I	L	K	P	C	A	I	S	P	V	K	L	T	E	L	T	S	I	E	K	I	S	D	D	E	R	Q	K	L	L	H	K	V	A	Q	I	T	R	N	I
Template Known Secondary structure			T	T	T	T	T	T											S	T	T	T	S																		T
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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