Job Description P41407 Confidence 99.60% Date Thu Jan 5 12:01:28 GMT 2012 Rank 41 Aligned Residues 155 % Identity 13% Template c3klbA_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:putative flavoprotein; PDBTitle: crystal structure of putative flavoprotein in complex with fmn2 (yp_213683.1) from bacteroides fragilis nctc 9343 at 1.75 a3 resolution Resolution 1.75 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		M	S	K	V	L	V	L	K	S	S	I	L	A	G	Y	S	Q	S	N	Q	L	S	D	Y	F	V	E	Q	W	R	E	K	H	S	A	D	E	I	T	V	R	D	L	A	A	N	P	I	.	P	V	L	D	G	E	L	V	G	A	L	R	P	S	D	A	P	L	T	P	R	Q	Q	E	A	L	A	L	S	D	E
Query Conservation																																																		.
Alig confidence												.	.				.																	.	.															.																													.	.	.
Template Conservation												.	.				.																	.	.																																												.	.	.
Template Sequence		D	R	K	I	L	V	A	Y	F	S	.	.	C	S	G	.	V	T	K	A	V	A	E	K	L	A	A	I	T	G	A	D	.	.	L	Y	E	I	K	P	E	V	P	Y	T	E	A	D	L	D	W	N	D	K	K	S	R	S	S	V	E	X	R	D	A	L	S	R	P	A	I	S	G	T	L	F	H	.	.	.
Template Known Secondary structure		G	S									.	.	S	S	S	.														T			.	.						B	S	S				T	G	G	G		T	T		T	T	S							T		T	T					B	S				S		.	.	.
Template Predicted Secondary structure												.	.				.																	.	.																																												.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.			.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	A	E	L	K	A	H	D	V	I	V	I	A	A	P	M	Y	N	F	N	I	S	T	Q	L	K	N	Y	F	D	L	V	A	R	A	G	V	T	F	R	Y	T	E	N	G	P	E	G	L	V	T	G	K	K	A	I	V	I	T	S	R	G	G	I	H	K	D	G	P	T	D	L	V	T	P	Y	L	S	T
Query Conservation
Alig confidence		.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Template Conservation		.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Template Sequence		.	.	.	.	P	E	K	Y	E	V	L	F	V	G	F	P	V	W	W	Y	I	A	P	T	I	I	N	T	F	L	E	S	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	A	G	K	I	V	V	P	F	A	T	S	G	G	S	G	I	G	N	C	.	.	.	.	.	.	.	E	K	N
Template Known Secondary structure		.	.	.	.	G	G	G		S									B	T	T	B											T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T										S	S			S				.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Template SS confidence
						75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.								.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	G	F	I	G	I	T	D	V	K	F	V	F	A	E	G	I	A	Y	G	P	E	M	A	A	K	A	Q	S	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	H	K	A	Y	P	D	I	V	W	K	D	G	K	L	L	N	G	Q	I	T	R	D	L	V	T	E	W	F	E	K
Template Known Secondary structure							T	T	S										S
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions