Job Description P41407 Confidence 100.00% Date Thu Jan 5 12:01:28 GMT 2012 Rank 16 Aligned Residues 169 % Identity 19% Template c3k1yE_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:oxidoreductase; PDBTitle: x-ray structure of oxidoreductase from corynebacterium2 diphtheriae. orthorombic crystal form, northeast structural3 genomics consortium target cdr100d Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.					.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.
Query SS confidence																																		.	.	.	.
Query Sequence		M	S	K	V	L	V	L	K	S	S	I	L	A	G	Y	S	Q	S	N	Q	L	S	D	Y	F	V	E	Q	W	R	E	K	.	.	.	.	H	S	A	D	E	I	T	V	R	D	L	A	A	N	P	I	P	V	L	D	G	E	L	V	G	A	L	R	P	S	D	A	P	L	T	P	R	Q	Q	E	A	L	A	L
Query Conservation																																		.	.	.	.
Alig confidence																.																		.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	R	T	L	A	V	I	S	A	G	L	S	T	P	.	S	S	T	R	Q	I	A	D	S	I	S	E	A	V	T	A	A	V	S	A	R	G	E	A	L	S	V	S	T	I	E	L	S	E	L	I	P	D	L	X	T	A	X	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	V	H	T	T	K
Template Known Secondary structure													S	S	S	.																				T	T	T										G	G	G										T	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure																.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.															.	60	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	E	L	I	A	E	L	K	A	H	D	V	I	V	I	A	A	P	M	Y	N	F	N	I	S	T	Q	L	K	N	Y	F	D	L	V	A	R	A	G	V	T	F	R	Y	T	E	N	G	P	E	G	L	V	T	G	K	K	A	I	V	I	T	S	R	G	G	I	H	K	D	G	P	T	D	L	V	T	P	Y
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Sequence		L	E	E	I	T	S	A	L	S	A	S	D	G	L	V	V	A	T	P	V	F	K	A	S	Y	T	G	L	F	K	X	F	F	D	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	D	A	L	T	G	X	P	T	I	I	A	A	T	A	G	S	A	R	H	S	L	V	.	.	.	L	D	Y	A
Template Known Secondary structure										T	T		S									B	T	T	B												S	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S	S	T	T										S	S	S	T	T	T	T		.	.	.				T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.														.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		L	S	T	F	L	G	F	I	G	I	T	D	V	.	K	F	V	F	A	E	G	I	A	Y	G	P	E	M	A	A	K	A	Q	S	D	A	K	A	A	I	D	S	I	V	S
Query Conservation															.
Alig confidence															.
Template Conservation
Template Sequence		L	R	P	L	L	S	Y	X	R	A	V	V	V	P	T	G	V	F	A	A	T	E	D	F	G	G	P	E	G	A	E	F	N	K	R	I	A	R	A	A	G	E	L	A	S
Template Known Secondary structure									T	T					S							G	G	G		S	S
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions