Return to main results Retrieve Phyre Job Id

Job DescriptionP41407
Confidence47.15%DateThu Jan 5 12:01:28 GMT 2012
Rank129Aligned Residues102
% Identity15%Templatec3hn2A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:2-dehydropantoate 2-reductase; PDBTitle: crystal structure of 2-dehydropantoate 2-reductase from geobacter2 metallireducens gs-15
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  KVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLAANPIPVLDGELVGALRPSDAPLTPRQQEALALSDELIA
Query Conservation 




 



   
 
  
                
   

    
                                  
Alig confidence 




.....















......







.......
































Template Conservation 

 

.....
 
 

   
  
   ......
  
    .......
     
   
                     
Template Sequence  RIAIV. . . . . GAGALGLYYGALLQRS. . . . . . GEDVHFLL. . . . . . . RRDYEAIAGNGLKVFSINGDFTLPHVKGYRAPE
Template Known Secondary structure 
.....

STTT......S


.......STTT
TT

S


S
Template Predicted Secondary structure 
.....



......

.......




















Template SS confidence 















































































   2.... ...10.........20.. .......30 .........40.........50.........60...
 
   83......90.........100.........110.........120.........130.........140..
Predicted Secondary structure 


























Query SS confidence 



























































Query Sequence  ELKAHDVIVIAAPMYNFNISTQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRG
Query Conservation   
  

 

  



   


 

  



                 
  
    
 
 
Alig confidence 














......









..............














Template Conservation       
 


 
   ......        
 ..............  
     

    
Template Sequence  EIGPMDLVLVGLKTF. . . . . . ANSRYEELIR. . . . . . . . . . . . . . PLVEEGTQILTLQNG
Template Known Secondary structure 


S


GG......GGGGG..............GG

TT


SS
Template Predicted Secondary structure 







....................








Template SS confidence 



























































   64.....70........ .80........ .90.........100...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions