Job Description P41407 Confidence 99.54% Date Thu Jan 5 12:01:28 GMT 2012 Rank 43 Aligned Residues 143 % Identity 17% Template c3hlyA_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:flavodoxin-like domain; PDBTitle: crystal structure of the flavodoxin-like domain from2 synechococcus sp q5mzp6_synp6 protein. northeast structural3 genomics consortium target snr135d. Resolution 2.40 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	V	L	K	S	S	I	L	A	G	Y	S	Q	S	N	Q	L	S	D	Y	F	V	E	Q	W	R	E	K	H	S	A	D	E	I	T	V	R	D	L	A	A	N	P	I	P	V	L	D	G	E	L	V	G	A	L	R	P	S	D	A	P	L	T	P	R	Q	Q	E	A	L	A	L	S	D	E	L	I	A	E
Query Conservation
Alig confidence											.	.		.																	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.		.																	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	I	G	Y	L	S	D	Y	.	.	G	.	Y	S	D	R	L	S	Q	A	I	G	R	G	L	V	K	T	.	.	G	V	A	V	E	X	V	D	L	R	A	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	E	L	I	E	A
Template Known Secondary structure								T	T	S	.	.	T	.	T															T	.	.	T								T	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.		.																	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.			.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.			.	290	.	.	.	.	.	.	.	.	.	300	.																														.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	A	H	D	V	I	V	I	A	A	P	M	Y	N	F	N	I	S	T	Q	L	K	N	Y	F	D	L	V	A	R	A	G	V	T	F	R	Y	T	E	N	G	P	E	G	L	V	T	G	K	K	A	I	V	I	T	S	R	G	G	I	H	K	D	G	P	T	D	L	V	T	P	Y	L	S	T	F	L	G	F
Query Conservation
Alig confidence																.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Template Conservation																.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Template Sequence		V	S	S	A	R	G	I	V	L	G	T	P	P	S	.	.	Q	P	S	E	A	V	A	T	A	L	S	T	I	F	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	N	K	Q	A	I	G	L	F	D	S	Y	G	G	D	D	E	.	.	.	.	.	.	P	I	D	A	L	L	A	Q	F	R	N
Template Known Secondary structure						S								B	S	.	.	S																.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S										S	S	B		.	.	.	.	.	.
Template Predicted Secondary structure																.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.			.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.														.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.							.	.	.	360	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	I	T	D	V	K	F	V	F	A	E	G	I	A	Y	G	P	E	M	A	A	K	A	Q	S	D	A	K	A	A	I	D	S	I	V	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	L	H	T	A	F	P	P	I	R	V	K	D	Q	P	T	E	A	I	Y	Q	Q	C	E	E	S	G	T	D	L	G	Q	W	L	T	R	A
Template Known Secondary structure		T	T				S	S	S		B				S	S
Template Predicted Secondary structure
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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