Job Description P41407 Confidence 100.00% Date Thu Jan 5 12:01:28 GMT 2012 Rank 19 Aligned Residues 170 % Identity 20% Template c3fvwA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative nad(p)h-dependent fmn reductase; PDBTitle: crystal structure of the q8dwd8_strmu protein from2 streptococcus mutans. northeast structural genomics3 consortium target smr99. Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	V	L	V	L	K	S	S	I	L	A	G	Y	S	Q	S	N	Q	L	S	D	Y	F	V	E	Q	W	R	E	K	H	S	A	D	E	I	T	V	R	D	L	A	A	N	P	I	P	V	L	D	G	E	L	V	G	A	L	R	P	S	D	A	P	L	T	P	R	Q	Q	E	A	L	A	L	S	D	E	L	I
Query Conservation
Alig confidence															.																	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.																	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	R	I	L	F	I	V	G	S	F	S	E	G	.	S	F	N	R	Q	L	A	K	K	A	E	T	I	I	G	D	.	.	.	R	A	Q	V	S	Y	L	S	Y	D	R	V	P	F	F	N	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	E	T	S	V	H	P	E	V	A	H	A	R
Template Known Secondary structure									S			S	T	T	.															T	T	.	.	.	S	S								S	S						G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	T	T	S
Template Predicted Secondary structure															.																	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.																	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	L	K	A	H	D	V	I	V	I	A	A	P	M	Y	N	F	N	I	S	T	Q	L	K	N	Y	F	D	L	V	A	R	A	G	V	T	F	R	Y	T	E	N	G	P	E	G	L	V	T	G	K	K	A	I	V	I	T	S	R	G	G	I	H	K	D	G	P	T	D	L	V	T	P	Y	L	S	T	F	L
Query Conservation
Alig confidence																																														.	.	.																		.	.	.	.	.	.	.
Template Conservation																																														.	.	.																		.	.	.	.	.	.	.
Template Sequence		E	E	V	Q	E	A	D	A	I	W	I	F	S	P	V	Y	N	Y	A	I	P	G	P	V	K	N	L	L	D	W	L	S	R	S	L	D	L	S	D	P	T	G	P	S	.	.	.	V	L	Q	D	K	I	V	T	V	S	S	V	A	N	G	A	E	.	.	.	.	.	.	.	V	F	E	D	Y	R	S	L	L
Template Known Secondary structure								S									B	T	T	B													T	S		S		S	S		T	T	S			.	.	.	T	T	T	T									S					.	.	.	.	.	.	.		S
Template Predicted Secondary structure																																														.	.	.																		.	.	.	.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.								.	.	.	.	.	.	130	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.							.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																									.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.
Query Sequence		G	F	I	G	I	T	D	V	K	F	V	F	A	E	G	I	A	Y	G	P	E	M	A	.	.	.	.	.	.	A	K	A	Q	S	D	A	K	A	A	I	D	S	I	V	S	A
Query Conservation																									.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.
Template Conservation
Template Sequence		P	F	I	R	X	H	L	V	D	Q	L	T	G	V	P	I	N	S	E	A	W	S	T	G	I	L	K	V	S	A	E	K	L	A	E	L	S	A	Q	A	D	A	L	L	S	A
Template Known Secondary structure				T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions