Return to main results Retrieve Phyre Job Id

Job DescriptionP41407
Confidence99.97%DateThu Jan 5 12:01:28 GMT 2012
Rank24Aligned Residues168
% Identity19%Templatec3eywA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:c-terminal domain of glutathione-regulated potassium-efflux PDBTitle: crystal structure of the c-terminal domain of e. coli kefc in complex2 with keff
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  MSKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLAANPIPVLDGELVGALRPSDAPLTPRQQEALALSDEL
Query Conservation 
 




 



   
 
  
                
   

    
                                
Alig confidence 















...











...

















.......................




Template Conservation     



  

    
...  
  
      ...   
 
  
   

   
.......................

  
Template Sequence  VEMILIIYAHPYPHHS. . . HANKRMLEQART. . . LEGVEIRSLYQLYPDFNI. . . . . . . . . . . . . . . . . . . . . . . DIAAE
Template Known Secondary structure 



S
TTT
...ST...STT
TTS

.......................
Template Predicted Secondary structure 




...
...











.......................
Template SS confidence 















































































   561........570...... ...580........ .590.........600...... ...610.
 
   81........90.........100.........110.........120.........130.........140..... ....150....
Predicted Secondary structure 





























......



Query SS confidence 
































































. . . . . .








Query Sequence  IAELKAHDVIVIAAPMYNFNISTQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRGGIH. . . . . . KDGPTDLVT
Query Conservation     
  

 

  



   


 

  



                 
  
    
 
 
   ......         
Alig confidence 










































....

















......








Template Conservation 
  
  

 

 


 



 

 

 
 
 
   
 


  
....  
 

      
 
     
   
      

Template Sequence  QEALSRADLIVWQHPMQWYSIPPLLKLWIDKVFSHGWAYGHGG. . . . TALHGKHLLWAVTTGGGESHFEIGAHPGFDVLS
Template Known Secondary structure  T
S

SSS

S
BTTTBSSS
....
TTTT

SS
GGGG

SSS
SGGGGG
Template Predicted Secondary structure 




















....

















Template SS confidence 















































































   1050.........1060.........1070.........1080.........1090.. .......1100.........1110.........1120.....
 
   155....160.........170........ .180.........190.........200.
Predicted Secondary structure 








.



Query SS confidence 























.






















Query Sequence  PYLSTFLGFIGITDVKFVFAEGIA. YGPEMAAKAQSDAKAAIDSIVSA
Query Conservation    
       
      
   
  .            
      

 
Alig confidence 























.






















Template Conservation   
    
   

  
 

            
      
   
    
 
Template Sequence  QPLQATAIYCGLNWLPPFAMHCTFICDDETLEGQARHYKQRLLEWQEA
Template Known Secondary structure  TT






SS

TTT
Template Predicted Secondary structure 











Template SS confidence 















































   1126...1130.........1140.........1150.........1160.........1170...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions