Job Description P41407 Confidence 99.54% Date Thu Jan 5 12:01:28 GMT 2012 Rank 44 Aligned Residues 126 % Identity 13% Template c3edoA_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:putative trp repressor binding protein; PDBTitle: crystal structure of flavoprotein in complex with fmn2 (yp_193882.1) from lactobacillus acidophilus ncfm at 1.203 a resolution Resolution 1.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	V	L	V	L	K	S	S	I	L	A	G	Y	S	Q	S	N	Q	L	S	D	Y	F	V	E	Q	W	R	E	K	H	S	A	D	E	I	T	V	R	D	L	A	A	N	P	I	P	V	L	D	G	E	L	V	G	A	L	R	P	S	D	A	P	L	T	P	R	Q	Q	E	A	L	A	L	S	D	E	L	I
Query Conservation
Alig confidence											.	.				.																.	.	.																																											.	.	.	.	.
Template Conservation											.	.				.																.	.	.																																											.	.	.	.	.
Template Sequence		K	K	T	L	I	L	Y	Y	S	.	.	W	S	G	.	E	T	K	K	X	A	E	K	I	N	S	E	I	K	D	.	.	.	S	E	L	K	E	V	K	V	S	E	G	T	F	D	A	D	Y	K	T	S	D	I	A	L	D	Q	I	Q	G	N	K	D	F	P	E	I	Q	L	D	N	I	D	.	.	.	.	.
Template Known Secondary structure											.	.	S	S	S	.													S	T	T	.	.	.							B			T	T	S	S															T	T	S	S						B						.	.	.	.	.
Template Predicted Secondary structure											.	.				.																.	.	.																																											.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.			.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.				30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	L	K	A	H	D	V	I	V	I	A	A	P	M	Y	N	F	N	I	S	T	Q	L	K	N	Y	F	D	L	V	A	R	A	G	V	T	F	R	Y	T	E	N	G	P	E	G	L	V	T	G	K	K	A	I	V	I	T	S	R	G	G	I	H	K	D	G	P	T	D	L	V	T	P	Y
Query Conservation
Alig confidence		.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	Y	N	N	Y	D	L	I	L	I	G	S	P	V	W	S	G	Y	P	A	T	P	I	K	T	L	L	D	Q	X	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	N	Y	R	G	E	V	A	S	F	F	T	S	A	G	T	N	H	K	A	Y	V	S	H	F	N	E	W
Template Known Secondary structure		.	.	G	G	G		S										T	T				T									T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T			S									S	S
Template Predicted Secondary structure		.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.																	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions