Return to main results Retrieve Phyre Job Id

Job DescriptionP41407
Confidence99.81%DateThu Jan 5 12:01:28 GMT 2012
Rank32Aligned Residues150
% Identity19%Templatec3d7nA_
PDB info PDB header:electron transportChain: A: PDB Molecule:flavodoxin, wrba-like protein; PDBTitle: the crystal structure of the flavodoxin, wrba-like protein from2 agrobacterium tumefaciens
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  SKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLAANPIPVLDGELVGALRPSDAPLTPRQQEALALSDELI
Query Conservation   




 



   
 
  
                
   

    
                                 
Alig confidence 









..

.















..











................................


Template Conservation   
 



 
 .. 
.

   
  

 
    ..            ................................   
Template Sequence  SNTVVVYHSG. . YG. HTHRXAEAVAEGAEAT. . LHAIDAEGNLSE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DGW
Template Known Secondary structure 



S..SS.T
..

TTS


................................
Template Predicted Secondary structure 



..

.
..










................................

Template SS confidence 















































































   7..10...... .. .20.........30.... .....40...... ...
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  AELKAHDVIVIAAPMYNFNISTQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRGGIHKDGPTDLVTPYLSTFL
Query Conservation    
  

 

  



   


 

  



                 
  
    
 
 
              
    
Alig confidence 

































.........




















..













Template Conservation    
  

 

 


 
        
 


     .........       

    
 
 
   ..

       
   
Template Sequence  AALDAADAIIFGTPTYXGGPSWQFKKFADASSKP. . . . . . . . . WFSAKWQDKVFGGFTNSASLN. . GDKLNTLQYLVLLA
Template Known Secondary structure 
STT
T.........TTTTTT
SS
..
Template Predicted Secondary structure 











.........











..

Template SS confidence 















































































   50.........60.........70.........80... ......90.........100.... .....110........
 
   162.......170.........180.........190.........200
Predicted Secondary structure 











Query SS confidence 






































Query Sequence  GFIGITDVKFVFAEGIAYGPEMAAKAQSDAKAAIDSIVS
Query Conservation     
      
   
              
      

 
Alig confidence 
























.












Template Conservation     

  
                 .

 

 

  

 
Template Sequence  GQHGGLWVSLGYIAPXAQSEXSVGD. LETARLYGARVAN
Template Known Secondary structure  TT






S




.
Template Predicted Secondary structure 
















.
Template SS confidence 






































   119120.........130.........140... ......150......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions