Job Description P41407 Confidence 99.97% Date Thu Jan 5 12:01:28 GMT 2012 Rank 23 Aligned Residues 165 % Identity 21% Template c2vzhA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh-dependent fmn reductase; PDBTitle: structures of nadh:fmn oxidoreductase (emob)-fmn complex Resolution 2.5 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	L	V	L	K	S	S	I	L	A	G	Y	S	Q	S	N	Q	L	S	D	Y	F	V	E	Q	W	R	E	K	H	S	A	D	E	I	T	V	R	D	L	A	A	N	P	I	P	V	L	D	G	E	L	V	G	A	L	R	P	S	D	A	P	L	T	P	R	Q	Q	E	A	L	A	L	S	D	E	L	I	A
Query Conservation
Alig confidence														.																			.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.																			.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	I	V	A	I	S	G	S	P	S	R	N	.	S	T	T	A	K	L	A	E	Y	A	L	A	H	V	L	A	R	S	.	D	S	Q	G	R	H	I	H	V	I	D	L	D	P	K	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	G	D	L	S	N	A	K	L	K	E	A	V	D
Template Known Secondary structure										S	S	S	S	.																T	T	S	.	S								G	G	G	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T		T	T	S
Template Predicted Secondary structure														.																			.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	K	A	H	D	V	I	V	I	A	A	P	M	Y	N	F	N	I	S	T	Q	L	K	N	Y	F	D	L	V	A	R	A	G	V	T	F	R	Y	T	E	N	G	P	E	G	L	V	T	G	K	K	A	I	V	I	T	S	R	G	G	I	H	K	D	G	P	T	D	L	V	T	P	Y	L	S	T	F	L	G
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Sequence		A	T	C	N	A	D	G	L	I	V	A	T	P	I	Y	K	A	S	Y	T	G	L	L	K	A	F	L	D	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	F	A	L	A	G	K	A	A	L	P	L	A	T	G	G	S	P	A	H	V	L	A	.	.	.	L	D	Y	G	L	R	P	V	L	H
Template Known Secondary structure							S									B	T	T	B										T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	T	B	T										S	S	G	G	G	G	G		.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.														.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.						.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure									.																.	.	.	.	.
Query SS confidence									.																.	.	.	.	.
Query Sequence		F	I	G	I	T	D	V	.	K	F	V	F	A	E	G	I	A	Y	G	P	E	M	A	.	.	.	.	.	A	K	A	Q	S	D	A	K	A	A	I	D	S	I	V	S	A
Query Conservation									.																.	.	.	.	.
Alig confidence									.																.	.	.	.	.
Template Conservation
Template Sequence		S	M	G	V	R	H	V	V	Q	S	F	F	L	V	Q	S	Q	F	S	V	V	D	G	K	L	A	V	E	D	D	V	A	S	Q	L	N	N	A	I	D	H	F	R	L	S
Template Known Secondary structure			T	T	B	S										S	T	T			S	S	S	S	S	S	S	S																		T
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions