Job Description P41407 Confidence 99.72% Date Thu Jan 5 12:01:28 GMT 2012 Rank 38 Aligned Residues 146 % Identity 18% Template c2q9uB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:a-type flavoprotein; PDBTitle: crystal structure of the flavodiiron protein from giardia2 intestinalis Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	V	L	V	L	K	S	S	I	L	A	G	Y	S	Q	S	N	Q	L	S	D	Y	F	V	E	Q	W	R	E	K	H	S	A	D	E	I	T	V	R	D	L	A	A	N	P	I	P	V	L	D	G	E	L	V	G	A	L	R	P	S	D	A	P	L	T	P	R	Q	Q	E	A	L	A	L	S	D	E	L	I
Query Conservation
Alig confidence											.	.				.																	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.				.																	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	V	T	V	V	L	D	S	.	.	M	Y	G	.	T	T	H	R	M	A	L	A	L	L	D	G	A	R	S	T	.	.	G	C	E	T	V	L	L	E	M	T	S	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	K	V	A
Template Known Secondary structure		S									.	.	S	S	S	.																T	.	.	T								G	G	G			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.				.																	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.			.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290	.	.	.	.	.	.	.																														.	.	300	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	L	K	A	H	D	V	I	V	I	A	A	P	M	Y	N	F	N	I	S	T	Q	L	K	N	Y	F	D	L	V	A	R	A	G	V	T	F	R	Y	T	E	N	G	P	E	G	L	V	T	G	K	K	A	I	V	I	T	S	R	G	G	I	H	K	D	G	P	T	D	L	V	T	P	Y	L	S	T	F	L
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Sequence		L	H	T	Y	D	S	G	A	V	A	F	A	S	P	T	L	N	N	T	M	M	P	S	V	A	A	A	L	N	Y	V	R	.	.	.	.	.	.	.	.	.	.	.	.	G	L	T	L	I	K	G	K	P	A	F	A	F	G	A	F	G	W	S	N	R	.	.	.	.	.	.	A	V	P	D	I	V	A	E	L
Template Known Secondary structure								S										T	T															.	.	.	.	.	.	.	.	.	.	.	.			T	T	T	T	T	S	B								S	S	S			.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.													.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.							.	.	.	.	360	.	.	.	.
		162	.	.	.	.	.	.	.				170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure										.	.	.
Query SS confidence										.	.	.
Query Sequence		G	F	I	G	I	T	D	V	.	.	.	K	F	V	F	A	E	G	I	A	Y	G	P	E	M	A	A	K	A	Q	S	D	A	K	A	A	I	D	S	I	V	S
Query Conservation										.	.	.
Alig confidence										.	.	.								.
Template Conservation																				.
Template Sequence		R	D	G	C	K	A	D	V	Y	D	E	K	G	I	T	F	K	F	.	N	Y	T	E	E	L	L	E	Q	A	Y	N	A	G	V	D	L	G	K	R	A	I	A
Template Known Secondary structure				T	S			B				S	S						S	.
Template Predicted Secondary structure																				.
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.		.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions